standards > terminology artifact > DOI:10.25504/FAIRsharing.ez2nhb


ready Ontology for Parasite LifeCycle

Abbreviation: OPL


General Information
OPL models the life cycle stage details of T.cruzi and two related kinetoplastids, Trypanosoma brucei and Leishmania major. In addition, the ontology also models necessary contextual details such as host information, vector information, strain and anatomical location. OPL is based on the Basic Formal Ontology (BFO) and follows the rules set by the OBO Foundry consortium.

Homepage http://wiki.knoesis.org/index.php/Ontology_for_Parasite_Life_Cycle

Developed in United States

Created in 2011




How to cite this record FAIRsharing.org: OPL; Ontology for Parasite LifeCycle; DOI: https://doi.org/10.25504/FAIRsharing.ez2nhb; Last edited: Jan. 8, 2019, 1:29 p.m.; Last accessed: Jan 19 2019 8:20 a.m.


Record updated: March 22, 2018, 11:14 a.m. by The FAIRsharing Team.

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In Collections
OBO Foundry



Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use


Data Release

Release Notes https://github.com/OPL-ontology/OPL/wiki/ReleaseNotes



Publications

The Ontology for Parasite Lifecycle (OPL): towards a consistent vocabulary of lifecycle stages in parasitic organisms.

Parikh PP,Zheng J,Logan-Klumpler F,Stoeckert CJ Jr,Louis C,Topalis P,Protasio AV,Sheth AP,Carrington M,Berriman M,Sahoo SS
J Biomed Semantics 2012

View Paper (PubMed) View Publication

OPL Ontology Display

View in BioPortal.


Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.

View in OBO Foundry.



Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

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Implementing Databases (1)
OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.

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Grant Number(s)

  • 1R01HL087795-01A1 (National Heart, Lung and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA)