DataBase of Transcriptional Start Sites
Abbreviation:DBTSS
Homepage http://dbtss.hgc.jp
Countries that developed this resource Japan
Created in 2002
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: DBTSS; DataBase of Transcriptional Start Sites; DOI: https://doi.org/10.25504/FAIRsharing.f21e5v; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Jun 02 2020 8:08 a.m.
Record updated: Sept. 23, 2016, 2:44 p.m. by The FAIRsharing Team.
| help | http://dbtss.hgc.jp/?doc:help_2014.html |
| wikipedia | https://en.wikipedia.org/wiki/DBTSS |
Additional Information
| Contact | Yutaka Suzuki |
Conditions of Use
Data Versioning
| versioning by serial numbers | No link recorded |
| access to historical files available | No link recorded |
Data Release
| yearly release | No link recorded |
Data Curation
| manual curation | No link recorded |
Data Access
| file download(txt,tab-delimited) | ftp://ftp.hgc.jp/pub/hgc/db/dbtss/ |
| SQL database dump | No link recorded |
| browse | http://dbtss.hgc.jp/?doc:data_contents_2014.html |
| search | http://dbtss.hgc.jp/ |
DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data.
Suzuki A,Wakaguri H,Yamashita R,Kawano S,Tsuchihara K,Sugano S,Suzuki Y,Nakai K
Nucleic Acids Res 2014
Identification and characterization of cancer mutations in Japanese lung adenocarcinoma without sequencing of normal tissue counterparts.
Suzuki A,Mimaki S,Yamane Y,Kawase A,Matsushima K,Suzuki M,Goto K,Sugano S,Esumi H,Suzuki Y,Tsuchihara K
PLoS One 2013
DBTSS provides a tissue specific dynamic view of Transcription Start Sites.
Yamashita R., Wakaguri H., Sugano S., Suzuki Y., Nakai K.,
Nucleic Acids Res. 2010
DBTSS: database of transcription start sites, progress report 2008.
Wakaguri H., Yamashita R., Suzuki Y., Sugano S., Nakai K.,
Nucleic Acids Res. 2008
DBTSS: DataBase of Human Transcription Start Sites, progress report 2006.
Yamashita R., Suzuki Y., Wakaguri H., Tsuritani K., Nakai K., Sugano S.,
Nucleic Acids Res. 2006
DBTSS, DataBase of Transcriptional Start Sites: progress report 2004.
Suzuki Y., Yamashita R., Sugano S., Nakai K.,
Nucleic Acids Res. 2004
DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs.
Suzuki Y., Yamashita R., Nakai K., Sugano S.,
Nucleic Acids Res. 2002
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
No related databases defined
This record is not implemented by any policy.
Record Maintainer
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Funds
Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT), Tokyo, Japan (Government body)
Maintains
University of Tokyo, Japan (University)
National Bioscience Database Center (NBDC), Tokyo, Japan (Research institute)
University of Tokyo, Japan (University)
Grant Number(s)
221S0002 (Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT), Tokyo, Japan)
