standards > terminology artifact > DOI:10.25504/FAIRsharing.fr3ng0


deprecated Edinburgh Human Developmental Anatomy Abstract

Abbreviation: EHDAA


General Information
This record was deprecated on April 20, 2016 for the following reason(s): This resource is deprecated. Please see the following record for the next version of the ontology (https://biosharing.org/bsg-002675) instead.

A structured controlled vocabulary of stage-specific anatomical structures of the human. It has been designed to mesh with the mouse anatomy (EMAP ontology) and incorporates each Carnegie stage of development (CS1-20). This abstract version of the human developmental anatomy ontology compresses all the tissues present over Carnegie stages 1-20 into a single hierarchy. The heart, for example, is present from Carnegie Stage 9 onwards and is thus represented by 12 EHDA IDs (one for each stage). In the abstract mouse, it has a single ID so that the abstract term given as just heart really means heart (CS 9-20). This ontology was made computationally and later deemed "incoherent" by the authors because the stage-dependent hierarchical structures were not integrated.


This record is replaced by:

Homepage http://obofoundry.org/ontology/ehdaa.html

Countries that developed this resource United Kingdom

Created in 2010

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Knowledge Domains 




How to cite this record FAIRsharing.org: EHDAA; Edinburgh Human Developmental Anatomy Abstract; DOI: https://doi.org/10.25504/FAIRsharing.fr3ng0; Last edited: Jan. 8, 2019, 1:38 p.m.; Last accessed: Oct 19 2019 9:21 p.m.


Record updated: Nov. 21, 2016, 12:27 p.m. by The FAIRsharing Team.




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Additional Information

Contact Jonathan Bard

External Links

Bioportal http://bioportal.bioontology.org/ontologies/EHDAA
OBO http://obofoundry.org/ontology/ehdaa.html

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Publications

A new ontology (structured hierarchy) of human developmental anatomy for the first 7 weeks (Carnegie stages 1-20).

Bard J
J Anat 2012

View Paper (PubMed) View Publication

An ontology of human developmental anatomy.

Hunter A,Kaufman MH,McKay A,Baldock R,Simmen MW,Bard JB
J Anat 2003

View Paper (PubMed)

EHDAA Ontology Display

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OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.

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