databases > DOI:10.25504/FAIRsharing.frryvx

ready SUPERFAMILY

General Information
SUPERFAMILY is a database of structural and functional annotation for all proteins and genomes.

Homepage http://supfam.org

Developed in United Kingdom

Created in 2000

Taxonomic range





How to cite this record FAIRsharing.org: SUPERFAMILY; SUPERFAMILY; DOI: https://doi.org/10.25504/FAIRsharing.frryvx; Last edited: Jan. 8, 2019, 1:18 p.m.; Last accessed: Jan 24 2019 7:30 a.m.

How to cite this resource  Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. Gough J,Karplus K,Hughey R,Chothia C; J Mol Biol ; 2001; 10.1006/jmbi.2001.5080;


Record updated: Aug. 6, 2018, 6:37 p.m. by The FAIRsharing Team.

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Support

General

contact form http://supfam.org/SUPERFAMILY/feedback.h ...
help http://supfam.org/SUPERFAMILY/sitemap.ht ...
twitter @SUPERFAMILY

Additional Information

Contact Julian Gough

TeSS training resources 

Superfamily



Tools

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Conditions of Use

Applies to: Data use

Data Access

Download http://supfam.org/SUPERFAMILY/downloads.html
Search http://supfam.org/SUPERFAMILY/search.html
Advanced search http://supfam.org/SUPERFAMILY/hmm.html



Publications

The SUPERFAMILY database in 2007: families and functions.

Wilson D., Madera M., Vogel C., Chothia C., Gough J.,
Nucleic Acids Res. 2007

View Paper (PubMed) View Publication

SUPERFAMILY--sophisticated comparative genomics, data mining, visualization and phylogeny.

Wilson D., Pethica R., Zhou Y., Talbot C., Vogel C., Madera M., Chothia C., Gough J.,
Nucleic Acids Res. 2009

View Paper (PubMed) View Publication

SUPERFAMILY 1.75 including a domain-centric gene ontology method.

de Lima Morais DA., Fang H., Rackham OJ., Wilson D., Pethica R., Chothia C., Gough J.,
Nucleic Acids Res. 2011

View Paper (PubMed) View Publication

Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.

Gough J,Karplus K,Hughey R,Chothia C
J Mol Biol 2001

View Paper (PubMed) View Publication

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Credit

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Funds

Grant Number(s)

  • 213037 (EU FP7)

  • G022771 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)