databases > DOI:10.25504/FAIRsharing.frryvx

ready SUPERFAMILY

General Information
SUPERFAMILY is a database of structural and functional annotation for all proteins and genomes.

Homepage http://supfam.org

Countries that developed this resource United Kingdom

Created in 2000

Taxonomic range





How to cite this record FAIRsharing.org: SUPERFAMILY; SUPERFAMILY; DOI: https://doi.org/10.25504/FAIRsharing.frryvx; Last edited: Dec. 3, 2019, 1:22 p.m.; Last accessed: Jan 27 2020 7:30 a.m.

Publication for citation  The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver. Pandurangan AP,Stahlhacke J,Oates ME,Smithers B,Gough J; Nucleic Acids Res ; 2018; 10.1093/nar/gky1130;


This record is maintained by supfam

Record updated: Dec. 3, 2019, 1:21 p.m. by The FAIRsharing Team.

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General

Additional Information

TeSS training resources 

Superfamily



Tools

    No tools defined


Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access




Publications

The SUPERFAMILY database in 2007: families and functions.

Wilson D., Madera M., Vogel C., Chothia C., Gough J.,
Nucleic Acids Res. 2007

View Paper (PubMed) View Publication

SUPERFAMILY--sophisticated comparative genomics, data mining, visualization and phylogeny.

Wilson D., Pethica R., Zhou Y., Talbot C., Vogel C., Madera M., Chothia C., Gough J.,
Nucleic Acids Res. 2009

View Paper (PubMed) View Publication

SUPERFAMILY 1.75 including a domain-centric gene ontology method.

de Lima Morais DA., Fang H., Rackham OJ., Wilson D., Pethica R., Chothia C., Gough J.,
Nucleic Acids Res. 2011

View Paper (PubMed) View Publication

Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.

Gough J,Karplus K,Hughey R,Chothia C
J Mol Biol 2001

View Paper (PubMed) View Publication

The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver.

Pandurangan AP,Stahlhacke J,Oates ME,Smithers B,Gough J
Nucleic Acids Res 2018

View Paper (PubMed) View Publication

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Credit

Record Maintainer

  • This record is maintained by supfam

Funds

Maintains

Grant Number(s)

  • 213037 (EU FP7)

  • G022771 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)