standards > terminology artifact > DOI:10.25504/FAIRsharing.gdszhh


ready Banana Ontology

Abbreviation: CO_325


General Information
The Banana Ontology is part of the Crop Ontology (CO) project. The Crop Ontology has been created to compile validated concepts along with their inter-relationships on anatomy, structure and phenotype of Crops, on trait measurement and methods as well as on Germplasm with the multi-crop passport terms. The concepts of the CO are being used to curate agronomic databases and describe the data. The use of ontology terms to describe agronomic phenotypes and the accurate mapping of these descriptions into databases is important in comparative phenotypic and genotypic studies across species and gene-discovery experiments as it provides harmonized description of the data and therefore facilitates the retrieval of information.

Homepage http://www.cropontology.org/ontology/CO_325/Banana

Countries that developed this resource Worldwide

Created in 2016

Taxonomic range

Knowledge Domains 




How to cite this record FAIRsharing.org: CO_325; Banana Ontology; DOI: https://doi.org/10.25504/FAIRsharing.gdszhh; Last edited: Feb. 15, 2019, 2:22 p.m.; Last accessed: Jul 21 2019 7:52 p.m.


Record added: Jan. 18, 2018, 3:41 p.m.
Record updated: Sept. 4, 2018, 5:14 p.m. by The FAIRsharing Team.

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Support

General

support email Inge van den Bergh
support email Crop Ontology Helpdesk
forum Crop Ontology Forum
help Video Tutorials
online documentation Agroportal link

Additional Information

Contact Elizabeth Arnaud

Tools

    No tools defined


Schemas

No XSD schemas defined




Publications

No publications available



Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Implementing Databases (3)
Planteome
A resource providing data on bioentities and their associated ontology terms for Plant Biology. The database provides access to ontology-based annotations of genes, phenotypes and germplasms from about 90 plant species. A number of internal and external ontologies are used to annotate the biological data available from this resource.
AgroPortal
The AgroPortal project reuses the biomedical domain’s semantic tools and insights to serve agronomy, but also food, plant, agriculture and biodiversity sciences. We offer a portal that features ontology hosting, search, versioning, visualization, comment, and recommendation; enables semantic annotation; stores and exploits ontology alignments; and enables interoperation with the semantic web. The AgroPortal specifically satisfies requirements of the agronomy community in terms of ontology formats (e.g., SKOS vocabularies and trait dictionaries) and supported features (offering detailed metadata and advanced annotation capabilities). The AgroPortal content is automatically retrieved by FAIRsharing.org (https://fairsharing.org/) and the Agrisemantics Map of Data Standards (http://vest.agrisemantics.org/).
MusaBase
MusaBase is a breeding database designed for advanced breeding methods in banana breeding. It focuses on bananas that are important food crops in Africa, such as Mchare and Matooke bananas. Data in MusaBase comes mainly from breeding programs in Uganda (NARO Kawanda, IITA Sendusu) as well as Tanzania (IITA Arusha, newly located at Nelson Mandela University).

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