standards > model/format > DOI:10.25504/FAIRsharing.h6c48k


ready KEGG Mark-up Language

Abbreviation: KGML


General Information
The KEGG Markup Language (KGML) is an exchange format of the KEGG pathway maps, which is converted from internally used KGML+ (KGML+SVG) format. KGML enables automatic drawing of KEGG pathways and provides facilities for computational analysis and modeling of gene/protein networks and chemical networks.



How to cite this record FAIRsharing.org: KGML; KEGG Mark-up Language; DOI: https://doi.org/10.25504/FAIRsharing.h6c48k; Last edited: March 15, 2018, 11:55 a.m.; Last accessed: Oct 17 2018 6:46 a.m.


Record updated: March 15, 2018, 10:13 a.m. by The FAIRsharing Team.

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Support

General

Additional Information


Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use



REST Web Services



Publications

KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats.

Wrzodek C,Drager A,Zell A
Bioinformatics 2011

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined


Implementing Databases (1)
Integrated Pathway Analysis and Visualization System
iPAVS provides a collection of highly-structured manually curated human pathway data, it also integrates biological pathway information from several public databases and provides several tools to manipulate, filter, browse, search, analyze, visualize and compare the integrated pathway resources.

Implementing Policies

This record is not implemented by any policy.


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