How to cite this record FAIRsharing.org: NONCODE; NONCODE; DOI: https://doi.org/10.25504/FAIRsharing.hmb1f4; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Oct 19 2019 6:06 a.m.
Record updated: Sept. 12, 2016, 7:13 p.m. by The FAIRsharing Team.
Edits to 'https://fairsharing.org/FAIRsharing.hmb1f4' by 'The FAIRsharing Team' at 18:59, 12 Sep 2016 (approved): 'description' has been modified: Before: A database of noncoding RNAs. NONCODE is a database of all kinds of noncoding RNAs (except tRNAs and rRNAs). It is distinguished from other ncRNA databases by a number of factors. Firstly, almost all traditional ncRNA classes are included. NONCODE authors regularly update it to maintain an up-to-date and comprehensive resource. Secondly|all the sequences are confirmed by consulting the references manually|and more than 80% data are from experiments. Thirdly|NONCODE has used the concept of lncRNA genes to help systematic understanding of lncRNAs|based on alternative splicing pattern similar to mRNAs. Finally|the expression profile of lncRNA genes are available via graphs based on public RNA-seq data for human and mouse. They also attempt to predict functions of these lncRNA genes. After: NONCODE is a database of noncoding RNAs (except tRNAs and rRNAs). This resource is a comprehensive collection and annotation of noncoding RNAs including details of long noncoding (lnc) RNAs. The database provides access to data on the relationships of lncRNAs to disease, conservation annotation, and high-quality datasets.
Conditions of UseApplies to: Data use
|daily release||No link recorded|
|manual curation||No link recorded|
|file download(tab-delimited, FASTA)||http://www.noncode.org/download.php|
|SQL database dump||No link recorded|
NONCODE: an integrated knowledge database of non-coding RNAs.
Liu C., Bai B., Skogerbø G., Cai L., Deng W., Zhang Y., Bu D., Zhao Y., Chen R.,
Nucleic Acids Res. 2005
NONCODE v2.0: decoding the non-coding.
He S., Liu C., Skogerbø G., Zhao H., Wang J., Liu T., Bai B., Zhao Y., Chen R.,
Nucleic Acids Res. 2008
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Chinese Academy of Sciences (CAS), China (Research institute)
National Natural Science Foundation of China (NSFC), Beijing, China (Government body)
2014AA021103 (Ministry of Science and Technology, Beijing, China)
2014AA021502 (Ministry of Science and Technology, Beijing, China)
91229120 (National Natural Science Foundation of China (NSFC), Beijing, China)
XDA01020402 (Chinese Academy of Sciences (CAS), China)