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Candida Genome Database

Abbreviation:CGD

General Information

The Candida Genome Database (CGD) provides access to genomic sequence data and manually curated functional information about genes and proteins of the human pathogen Candida albicans. It collects gene names and aliases, and assigns gene ontology terms to describe the molecular function, biological process, and subcellular localization of gene products.

Homepage http://www.candidagenome.org/

Countries that developed this resource United States

Created in 2004

Taxonomic range

Candida

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: CGD; Candida Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.j7j53; Last edited: April 26, 2021, 8:34 a.m.; Last accessed: Sep 16 2021 10:36 p.m.

This record is maintained by marekskrzypek ORCID

Record updated: April 20, 2021, 2:33 p.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/FAIRsharing.j7j53' by 'The FAIRsharing Team' at 14:33, 20 Apr 2021 (approved):

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Edits to 'https://fairsharing.org/FAIRsharing.j7j53' by 'The FAIRsharing Team' at 10:31, 15 Sep 2016 (approved):

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Support

General

contact form	http://www.candidagenome.org/cgi-bin/sug ...
support email	candida-curator@lists.stanford.edu
help	http://www.candidagenome.org/HelpContent ...

Additional Information

Contact

Martha B. Arnaud

Tools

BLAST

http://www.candidagenome.org/cgi-bin/compute/blast_clade.pl

Access / Retrieve Data

Conditions of Use

Data Access

Download	http://www.candidagenome.org/DownloadContents.shtml
search	http://www.candidagenome.org/SearchContents.shtml
Gbrowse	http://www.candidagenome.org/GBrowseContents.shtml
Jbrowse	http://www.candidagenome.org/JBrowseContents.shtml
Phenotype ontology browser	http://www.candidagenome.org/cache/PhenotypeTree.html

Publications

The Candida Genome Database (CGD), a community resource for Candida albicans gene and protein information.

Arnaud MB., Costanzo MC., Skrzypek MS., Binkley G., Lane C., Miyasato SR., Sherlock G.,
Nucleic Acids Res. 2005

View Paper (PubMed) View Publication

The Candida genome database incorporates multiple Candida species: multispecies search and analysis tools with curated gene and protein information for Candida albicans and Candida glabrata.

Inglis DO., Arnaud MB., Binkley J., Shah P., Skrzypek MS., Wymore F., Binkley G., Miyasato SR., Simison M., Sherlock G.,
Nucleic Acids Res. 2012

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Gene Ontology

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

YeastMine

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by marekskrzypek ORCID

Funds

National Institute of Dental and Craniofacial Research (NIDCR), Rockville, MD, USA (Government body)

Maintains

CGD Research Trust (Government body)

Grant Number(s)

R01 DE015873 (National Institute of Dental and Craniofacial Research (NIDCR), Rockville, MD, USA)

Candida Genome Database

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