databases > DOI:10.25504/FAIRsharing.jhjnp0

ready Database of local DNA conformers

Abbreviation:Dolce

General Information
Dolce is a database of DNA structure motifs based on an automatic classification method consisting of the combination of supervised and unsupervised approaches. This workflow has been applied to analyze 816 X-ray and 664 NMR DNA structures released till February 2013. Dinucleotides with unassigned conformations are either classified into one of already known 24 classes or into one of six new classes among so far unclassifiable data, which were newly identified and annotated among X-ray structures by authors of this tool.

Homepage http://ich.vscht.cz/projects/dolce/viewHome

Developed in Czech Republic

Created in 2013

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How to cite this record FAIRsharing.org: Dolce; Database of local DNA conformers; DOI: https://doi.org/10.25504/FAIRsharing.jhjnp0; Last edited: Feb. 22, 2018, 3:02 p.m.; Last accessed: Nov 14 2018 10:26 p.m.


This record is maintained by krapnik  ORCID

Record added: Oct. 21, 2016, 4:24 p.m.
Record updated: May 25, 2017, 8:02 p.m. by The FAIRsharing Team.

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Contact Daniel Svozil   ORCID

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Publications

Automatic workflow for the classification of local DNA conformations.

Cech P,Kukal J,Cerny J,Schneider B,Svozil D
BMC Bioinformatics 2013

View Paper (PubMed) View Publication

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  • MSM 6046137302 (Ministry of Education, Youth and Sports, Prague, Czech Republic)

  • MSM 6046137306 (Ministry of Education, Youth and Sports, Prague, Czech Republic)

  • P305/12/1801 (Czech Science Foundation (GACR), Czech Republic)