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Evolutionary Annotation Database

Abbreviation:Evola

General Information

Evola contains ortholog information of all human genes among vertebrates. Orthologs are a pair of genes in different species that evolved from a common ancestral gene by speciation. In Evola, orthologs were detected by comparative genomics and amino acid sequence analysis (Computational analysis).

Homepage http://www.h-invitational.jp/evola/search.html

Countries that developed this resource Japan

Created in 2005

Taxonomic range

Homo sapiens

Vertebrata

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: Evola; Evolutionary Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.jp89d1; Last edited: June 15, 2021, 1:41 p.m.; Last accessed: Jul 28 2021 1:35 a.m.

Record updated: April 20, 2021, 2:07 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.jp89d1' by 'The FAIRsharing Team' at 14:07, 20 Apr 2021 (approved):

	'licences' has been modified:
		Before:
			Attribution required||Data
			Non-commercial use||Undefined
			Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0|http://opendatacommons.org/licenses/pddl/1.0/|Data
		After:
			Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0|http://opendatacommons.org/licenses/pddl/1.0/|Data
		Added:
		Removed:
			Attribution required||Data
			Non-commercial use||Undefined

	'miriam_id' has been modified:
		Before: None
		After: 

	'publications' has been modified:
		Before:
			Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees.|Matsuya A., Sakate R., Kawahara Y., Koyanagi KO., Sato Y., Fujii Y., Yamasaki C., Habara T., Nakaoka H., Todokoro F., Yamaguchi K., Endo T., Oota S., Makalowski W., Ikeo K., Suzuki Y., Hanada K., Hashimoto K., Hirai M., Iwama H., Saitou N., Hiraki AT., Jin L., Kaneko Y., Kanno M., Murakami K., Noda AO., Saichi N., Sanbonmatsu R., Suzuki M., Takeda J., Tanaka M., Gojobori T., Imanishi T., Itoh T., |Nucleic Acids Res.|2008
		After:
			Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees.|Matsuya A., et al.|Nucleic Acids Res.|2008
		Added:
			Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees.|Matsuya A., et al.|Nucleic Acids Res.|2008
		Removed:
			Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees.|Matsuya A., Sakate R., Kawahara Y., Koyanagi KO., Sato Y., Fujii Y., Yamasaki C., Habara T., Nakaoka H., Todokoro F., Yamaguchi K., Endo T., Oota S., Makalowski W., Ikeo K., Suzuki Y., Hanada K., Hashimoto K., Hirai M., Iwama H., Saitou N., Hiraki AT., Jin L., Kaneko Y., Kanno M., Murakami K., Noda AO., Saichi N., Sanbonmatsu R., Suzuki M., Takeda J., Tanaka M., Gojobori T., Imanishi T., Itoh T., |Nucleic Acids Res.|2008

Edits to 'https://fairsharing.org/FAIRsharing.jp89d1' by 'The FAIRsharing Team' at 16:20, 14 Sep 2016 (approved):

	'year' has been modified:
		Before: None
		After: 2005

Edits to 'https://fairsharing.org/FAIRsharing.jp89d1' by 'The FAIRsharing Team' at 16:10, 14 Sep 2016 (approved):

	'contactName' has been modified:
		Before:
			
		After:
			Ryuichi Sakate
			Domain list has changed: 
			Previous values:
			Genome|property|http://purl.org/obo/owl/SO#SO_0001026
			Orthology relationships||
			New values: 
			Genome|property|http://purl.org/obo/owl/SO#SO_0001026
			Orthology relationships||
			Life Science|domain|
			Comparative genomics|process|
			Amino acid sequence|material|http://purl.obolibrary.org/obo/CHEBI_33709
			Tools have changed: 
			Previous values:
			search
			BLAST
			search
			BLAST
			New values: 
			BLAST
			Support links have changed: 
			Previous values:
			http://www.h-invitational.jp/hinv/help/contents6/faq.html
			http://www.h-invitational.jp/hinv/help/help_Evola.html
			New values: 
			http://www.h-invitational.jp/hinv/help/contents6/faq.html
			http://www.h-invitational.jp/hinv/help/help_Evola.html
			hinvdb@ml.u-tokai.ac.jp
			Data processes have changed: 
			Previous values:
			Download
			manual curation
			manual curation
			New values: 
			Download
			manual curation
			Search
		Added:
		Removed:

In Collections

RDA Covid-19 WG Resources

Support

General

FAQ	http://www.h-invitational.jp/hinv/help/c ...
support email	hinvdb@ml.u-tokai.ac.jp
help	http://www.h-invitational.jp/hinv/help/h ...

Additional Information

Contact

Ryuichi Sakate

Tools

BLAST

http://www.h-invitational.jp/hinv/blast/blasttop.cgi

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0

Data Curation

manual curation

No link recorded

Data Access

Download	http://www.h-invitational.jp/hinv/dataset/download.cgi
Search	http://www.h-invitational.jp/evola/search.html

Publications

Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees.

Matsuya A., et al.
Nucleic Acids Res. 2008

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

FASTA Sequence Format

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

H-Invitational Database

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Maintains

Biomedical Informatics Laboratory, Department of Molecular Life Science, Division of Basic Medical Science and Molecular Medicine, Tokai University School of Medicine, Tokyo, Japan (University)

Evolutionary Annotation Database

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