Edits to 'https://fairsharing.org/FAIRsharing.jr30xc' by 'The FAIRsharing Team' at 13:39, 12 Feb 2019 (approved):
'organizations' has been modified:
Before:
PRABI Rhone-Alpes Bioinformatics Center, France|http://www.prabi.fr|Funds
The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr|Funds
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains,Funds
National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
Universite de Lyon, France|https://www.universite-lyon.fr/version-anglaise/udl-en-6709.kjsp|Maintains
The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr|Funds
After:
PRABI Rhone-Alpes Bioinformatics Center, France|http://www.prabi.fr|Maintains,Funds
The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr|Funds
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains,Funds
National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
Universite de Lyon, France|https://www.universite-lyon.fr/version-anglaise/udl-en-6709.kjsp|Maintains
Centre de Recherche en Cancerologie de Lyon (CRCL), France|http://www.crcl.fr/|Maintains
Added:
PRABI Rhone-Alpes Bioinformatics Center, France|http://www.prabi.fr|Maintains,Funds
Centre de Recherche en Cancerologie de Lyon (CRCL), France|http://www.crcl.fr/|Maintains
Removed:
PRABI Rhone-Alpes Bioinformatics Center, France|http://www.prabi.fr|Funds
'standardsImplemented' has been modified:
Before:
CLUSTAL-W Alignment Format
UniProtKB XML Format
CLUSTAL-W Dendrogram Guide File Format
FASTA Sequence Format
After:
CLUSTAL-W Alignment Format
UniProtKB XML Format
FASTA Sequence Format
Added:
Removed:
CLUSTAL-W Dendrogram Guide File Format
'supportLinks' has been modified:
Before:
help|https://bykdb.ibcp.fr/BYKdb/BYKdbHelp
After:
contact form|https://bykdb.ibcp.fr/BYKdb/BYKdbContact
help|https://bykdb.ibcp.fr/BYKdb/BYKdbHelp
online documentation|https://bykdb.ibcp.fr/BYKdb/BYKdbStats
online documentation|https://bykdb.ibcp.fr/BYKdb/BYKdbNews
Added:
contact form|https://bykdb.ibcp.fr/BYKdb/BYKdbContact
online documentation|https://bykdb.ibcp.fr/BYKdb/BYKdbStats
online documentation|https://bykdb.ibcp.fr/BYKdb/BYKdbNews
Removed:
'onto_domains' has been modified:
Before:
Protein sequence
After:
Protein sequence
Protein structure
Structure
molecular_function
Added:
Protein structure
Structure
molecular_function
Removed:
'dataProcesses' has been modified:
Before:
access to historical files available upon request
no versioning policy
automated annotation
monthly release
SQL database dump
file download(txt)
web interface
After:
Browse Precomputed Datasets
Browse Annotated Sequences
Added:
Browse Precomputed Datasets
Browse Annotated Sequences
Removed:
access to historical files available upon request
no versioning policy
automated annotation
monthly release
SQL database dump
file download(txt)
web interface
'publications' has been modified:
Before:
Characterization of a bacterial gene encoding an autophosphorylating protein tyrosine kinase.|Grangeasse C., Doublet P., Vaganay E., Vincent C., Delage G., Duclos B., Cozzone AJ., |Gene|1997
Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature.|Jadeau F., Bechet E., Cozzone AJ., Delage G., Grangeasse C., Combet C., |Bioinformatics|2008
Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes.|Bechet E., Guiral S., Torres S., Mijakovic I., Cozzone AJ., Grangeasse C., |Amino Acids|2009
After:
Characterization of a bacterial gene encoding an autophosphorylating protein tyrosine kinase.|Grangeasse C., Doublet P., Vaganay E., Vincent C., Delage G., Duclos B., Cozzone AJ., |Gene|1997
Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature.|Jadeau F., Bechet E., Cozzone AJ., Delage G., Grangeasse C., Combet C., |Bioinformatics|2008
Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes.|Bechet E., Guiral S., Torres S., Mijakovic I., Cozzone AJ., Grangeasse C., |Amino Acids|2009
BYKdb: the Bacterial protein tYrosine Kinase database.|Jadeau F,Grangeasse C,Shi L,Mijakovic I,Deleage G,Combet C|Nucleic Acids Res|2011
Added:
BYKdb: the Bacterial protein tYrosine Kinase database.|Jadeau F,Grangeasse C,Shi L,Mijakovic I,Deleage G,Combet C|Nucleic Acids Res|2011
Removed:
'tools' has been modified:
Before:
BlastP||https://npsa-prabi.ibcp.fr/cgi-bin/npsa_automat.pl?&page=/NPSA/npsa_blast.html
ClustalW||https://npsa-prabi.ibcp.fr/cgi-bin/npsa_automat.pl?&page=/NPSA/npsa_clustalw.html
After:
BlastP||https://npsa-prabi.ibcp.fr/cgi-bin/npsa_automat.pl?&page=/NPSA/npsa_blast.html
ClustalW||https://npsa-prabi.ibcp.fr/cgi-bin/npsa_automat.pl?&page=/NPSA/npsa_clustalw.html
Annotate||https://bykdb.ibcp.fr/BYKdb/BYKdbAnnotate
Added:
Annotate||https://bykdb.ibcp.fr/BYKdb/BYKdbAnnotate
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.jr30xc' by 'The FAIRsharing Team' at 09:51, 21 Nov 2018 (approved):
'domains' has been modified:
Before:
After:
Amino acid sequence
Life Science
Added:
Amino acid sequence
Life Science
Removed:
'organizations' has been modified:
Before:
The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr/en/project-based-funding-to-advance-french-research/|Funds
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains
National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
PRABI Rhone-Alpes Bioinformatics Center|http://www.prabi.fr|Funds
The French National Research Agency|http://www.agence-nationale-recherche.fr|Funds
Universite de Lyon|https://www.universite-lyon.fr/version-anglaise/udl-en-6709.kjsp|Maintains
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Funds
After:
The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr/en/project-based-funding-to-advance-french-research/|Funds
PRABI Rhone-Alpes Bioinformatics Center|http://www.prabi.fr|Funds
The French National Research Agency|http://www.agence-nationale-recherche.fr|Funds
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains,Funds
National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
Universite de Lyon|https://www.universite-lyon.fr/version-anglaise/udl-en-6709.kjsp|Maintains
Added:
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains,Funds
Removed:
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Funds
Edits to 'https://fairsharing.org/FAIRsharing.jr30xc' by 'The FAIRsharing Team' at 13:47, 02 Sep 2016 (approved):
'name' has been modified:
Before: BYKdb: The Bacterial protein tYrosine Kinase database
After: Bacterial protein tYrosine Kinase database
Edits to 'https://fairsharing.org/FAIRsharing.jr30xc' by 'The FAIRsharing Team' at 21:30, 31 Aug 2016 (approved):
'description' has been modified:
Before: Bacterial protein tYrosine Kinase database
After: Bacterial protein tYrosine Kinase database (BYKdb) contains computer-annotated BY-kinase sequences. The database web interface allows static and dynamic queries and provides integrated analysis tools including sequence annotation.