Cellular Microscopy Phenotype Ontology
Abbreviation: CMPO
Homepage http://www.ebi.ac.uk/cmpo/
Developed in United Kingdom
Created in 2013
Taxonomic range
Scope and data types
How to cite this record FAIRsharing.org: CMPO; Cellular Microscopy Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.knp11s; Last edited: Feb. 22, 2018, 2:12 p.m.; Last accessed: Oct 17 2018 10:29 p.m.
Record added: Sept. 17, 2015, 9:11 a.m.
Record updated:
Sept. 11, 2016, 6:50 p.m. by The FAIRsharing Team.
| contact form | https://www.ebi.ac.uk/panda/jira/secure/ ... |
| support email | jupp@ebi.ac.uk |
| online documentation | https://github.com/EBISPOT/CMPO |
Additional Information
| Contact | Gabriella Rustici ORCID |
External Links
| Bioportal | http://bioportal.bioontology.org/ontologies/CMPO |
TeSS training resources
Cellular microscopy phenotype ontology cmpo quick tour
No XSD schemas defined
Conditions of Use
Data Access
| search | http://www.ebi.ac.uk/ols/ontologies/cmpo |
| Download owl file | http://www.ebi.ac.uk/cmpo/cmpo.owl |
| Download obo file | http://www.ebi.ac.uk/cmpo/cmpo.obo |
The cellular microscopy phenotype ontology.
Jupp S,Malone J,Burdett T,Heriche JK,Williams E,Ellenberg J,Parkinson H,Rustici G
J Biomed Semantics 2016
View in BioPortal.
Reporting Guidelines
No guidelines defined
Terminology Artifacts
Models and Formats
No syntax standards defined
Identifier Schemas
No identifier schema standards defined
MitoCheck aims to integrate information on cellular function of human genes while giving access to supporting information such as microscopy images of phenotypes
Image Data Resource
IDR is a prototype platform for publishing, mining and integrating bioimaging data at scale, following the Euro-BioImaging/ELIXIR imaging strategy using the OMERO and Bio-Formats open source software built by the Open Microscopy Environment. Deployed on an OpenStack cloud running on the EMBL-EBI’s Embassy resource, it includes image data linked to independent studies from genetic, RNAi, chemical, localisation and geographic high content screens, super-resolution microscopy, and digital pathology.
This record is not implemented by any policy.
Record Maintainer
This record is maintained by gabriellarustici ORCID
Funds
Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)
Maintains
Swiss Institute of Bioinformatics (SIB), Switzerland (Research institute)
Grant Number(s)
258068 (EU FP7 Systems Microscopy)
284209 (EU FP7 BioMedBridges)
BB/M018423/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)
