standards > terminology artifact > DOI:10.25504/FAIRsharing.knp11s


ready Cellular Microscopy Phenotype Ontology

Abbreviation: CMPO


General Information
Cellular Microscopy Phenotype Ontology (CMPO), a species neutral ontology for describing general phenotypic observations relating to the whole cell, cellular components, cellular processes and cell populations

Homepage http://www.ebi.ac.uk/cmpo/

Countries that developed this resource United Kingdom

Created in 2013

Taxonomic range




How to cite this record FAIRsharing.org: CMPO; Cellular Microscopy Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.knp11s; Last edited: Jan. 15, 2019, 1:30 p.m.; Last accessed: Aug 19 2019 2:32 p.m.

Publication for citation  The cellular microscopy phenotype ontology. Jupp S,Malone J,Burdett T,Heriche JK,Williams E,Ellenberg J,Parkinson H,Rustici G; J Biomed Semantics ; 2016; 10.1186/s13326-016-0074-0;


This record is maintained by gabriellarustici  ORCID

Record added: Sept. 17, 2015, 9:11 a.m.
Record updated: Jan. 15, 2019, 1:25 p.m. by The FAIRsharing Team.

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Support

General

Additional Information

External Links

TeSS training resources 

Cellular microscopy phenotype ontology cmpo quick tour




Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access




Publications

The cellular microscopy phenotype ontology.

Jupp S,Malone J,Burdett T,Heriche JK,Williams E,Ellenberg J,Parkinson H,Rustici G
J Biomed Semantics 2016

View Paper (PubMed) View Publication

CMPO Ontology Display

View in BioPortal.


Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.


Related Standards

Reporting Guidelines

No guidelines defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Implementing Databases (2)
MitoCheck
MitoCheck aims to integrate information on cellular function of human genes while giving access to supporting information such as microscopy images of phenotypes.

Image Data Resource
IDR is a prototype platform for publishing, mining and integrating bioimaging data at scale, following the Euro-BioImaging/ELIXIR imaging strategy using the OMERO and Bio-Formats open source software built by the Open Microscopy Environment. Deployed on an OpenStack cloud running on the EMBL-EBI’s Embassy resource, it includes image data linked to independent studies from genetic, RNAi, chemical, localisation and geographic high content screens, super-resolution microscopy, and digital pathology.

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Funds

Grant Number(s)

  • BB/M018423/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • EU FP7 258068 (Systems Microscopy Network of Excellence, European Union)

  • EU FP7 284209 (BioMedBridges, Europe)