standards > terminology artifact > DOI:10.25504/FAIRsharing.kx2md1


in development Ontology of Immune Epitopes

Abbreviation: ONTIE


General Information
The Ontology of Immune Epitopes (ONTIE) is an effort to represent terms in the immunology domain in a formal ontology with the specific goal of representing experiments that identify and characterize immune epitopes. ONTIE has been developed as a subset of OBI (Ontology of Biomedical Investigations) and includes terms relating to experiments involving immune epitopes. This file contains the minimal amount of upper ontology terms and axioms from BFO (Basic Formal Ontology), IAO (Information Artifact Ontology) and OBI, in order to view and reason upon ONTIE. It is currently at version 0.1 beta. ONTIE covers terms regarding immune responses, adaptive immune receptors, immune epitope assays, MHC molecules, and infectious diseases. ONTIE is (at this development stage) a virtual ontology, drawing together terms from multiple reference ontologies. We are actively working on adding more terms to ONTIE either through term requests or through active contribution to external ontologies.

Homepage http://ontology.iedb.org

Developed in United States

Taxonomic range




How to cite this record FAIRsharing.org: ONTIE; Ontology of Immune Epitopes; DOI: https://doi.org/10.25504/FAIRsharing.kx2md1; Last edited: Jan. 8, 2019, 1:38 p.m.; Last accessed: Mar 26 2019 3:49 a.m.


This record is maintained by bpeters  ORCID  and rvita

Record added: Oct. 17, 2016, 10:06 p.m.
Record updated: Jan. 8, 2019, 1:38 p.m. by The FAIRsharing Team.




Support

General

online documentation http://ontology.iedb.org/iedb.htm

Additional Information

Contact Bjoern Peters

Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use


Data Access

Download http://ontology.iedb.org/downloads.htm
Export as RDF http://ontology.iedb.org/iedb.htm

Other Web Services

SPARQL Endpoint http://virtuoso.liai.org:30080/


Publications

No publications available



Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Implementing Databases (1)
Immune Epitope Database
The IEDB provides the scientific community with a central repository of freely accessible epitope data and epitope prediction and analysis resources. The IEDB is a publicly accessible, comprehensive immune epitope database containing peptidic linear and conformational epitopes and non peptidic epitopes such as lipids, metals, drugs, carbohydrates, etc, with published or submitted antibody, T cell, MHC binding or MHC ligand elution experimental assays. Epitope data related to infectious diseases, allergy, autoimmunity and transplant tested in humans, non human primates, and any other species can be found in the IEDB.

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Maintains