Protein InFormation Resource Format
Abbreviation: PIFRF
Homepage http://emboss.sourceforge.net/docs/themes/seqformats/NbrfFormat.html
Countries that developed this resource Germany , Japan , United States
Created in 1993
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: PIFRF; Protein InFormation Resource Format; DOI: https://doi.org/10.25504/FAIRsharing.m5swgj; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: Jan 27 2021 10:51 p.m.
Record updated: Nov. 28, 2016, 10:03 a.m. by The FAIRsharing Team.
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Conditions of Use
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Terminology Artifacts
No semantic standards defined
Models and Formats
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This is a database of comparative protein structure models of the MIP (Major Intrinsic Protein) family of proteins. The MIPs have been identified from the completed genome sequence of organisms available at NCBI.
PASS2
PASS2 contains alignments of structural motifs of protein superfamilies. PASS2 is an automatic version of the original superfamily alignment database, CAMPASS (CAMbridge database of Protein Alignments organised as Structural Superfamilies). PASS2 contains alignments of protein structures at the superfamily level and is in direct correspondence with SCOPe 2.04 release.
Integrated resource of protein families, domains and functional sites
InterPro is a resource that provides functional analysis of protein sequences by classifying them into families and predicting the presence of domains and important sites. To classify proteins in this way, InterPro uses predictive models, known as signatures, provided by several different databases (referred to as member databases) that make up the InterPro consortium.
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Maintains
PIR (Research institute)