Worldwide Protein Data Bank
Abbreviation:wwPDB
Homepage http://www.wwpdb.org
Developed in Japan , United Kingdom , United States
Created in 2003
Taxonomic range
Scope and data types
In the following recommendations:
How to cite this record FAIRsharing.org: wwPDB; Worldwide Protein Data Bank; DOI: https://doi.org/10.25504/FAIRsharing.mckkb4; Last edited: Feb. 22, 2018, 2:58 p.m.; Last accessed: Nov 17 2018 9:57 p.m.
Record added: May 20, 2015, 1:05 p.m.
Record updated:
Aug. 16, 2016, 3:12 p.m. by The FAIRsharing Team.
| FAQ | http://www.wwpdb.org/deposition/faq |
| FAQ | http://www.wwpdb.org/about/faq |
| contact form | http://pdbj.org/contact?tab=PDBjmaster |
| support email | bmrbhelp@bmrb.wisc.edu |
| training | http://www.wwpdb.org/deposition/tutorial |
Additional Information
| Contact | info@wwpdb.org |
Conditions of Use
Data Curation
| Data deposition | http://deposit.wwpdb.org/deposition/ |
Data Access
| Download Data | http://www.wwpdb.org/download/downloads |
Announcing the worldwide Protein Data Bank
Helen Berman, Kim Henrick & Haruki Nakamura
Nature Structural & Molecular Biology 2003
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Models and Formats
- ProtoNet
- Compilation and Creation of datasets from PDB
- Nematode.net
- Pocket Similarity Search using Multiple-Sketches
- MetalPDB
- FireDB
- Chemical Component Dictionary
- Protein Data Bank in Europe
- ArchDB
- Protein Data Bank Japan
- RCSB Protein Data Bank
- 3D interacting domains
- Antimicrobial Peptide Database
- Biological Magnetic Resonance Databank
- Structural Biology Data Grid
- Database of local DNA conformers
- Mutual Folding Induced by Binding Database
- Disordered Binding Sites Database
- Small angle scattering biological data bank
- PDZscape
- database of Disease-Gene Associations with annotated Relationships
- PROtein-protein compleX MutAtion ThErmodynamics Database
- Allosteric Mutation Analysis and Polymorphism of Signaling database
- American Society for Biochemistry and Molecular Biology - Molecular and Cellular Proteomics - Resources for Authors
- Springer Nature - Nature Structural & Molecular Biology - Availability of Data and materials
- Cell Press - Cell Metabolism - Information for Authors
- Springer Nature - Nature - Availability of Data and materials
- National Academy of Sciences - Proceedings of the National Academy of Sciences - Editorial Policies
- The Plant Cell - Instructions for Authors
- Cell Press - Current Biology - Information for Authors
- Springer Nature - Nature Materials - Availability of Data and materials
- Open Research Data and Data Management Plans - Information for ERC grantees by the ERC Scientific Council
- Springer Nature - Nature Biotechnology - Availability of Data and materials
- Rockefeller University Press - Journal Of Cell Biology - Data Deposition
- Rockefeller University Press - Journal Of Experimental Medicine - Data Deposition
- Springer Nature - Research Data Policies
- Cell Press - Neuron - Information for Authors
- Springer Nature Research Data Policy Type 4
- Cold Spring Harbor Lab Press - Genome Research
- Springer Nature - Nature Immunology - Availability of Data and materials
- GigaScience - Minimum Standards of Reporting Checklist
- Cell Press - Cell - Information for Authors
- Cell Press - Cancer Cell - Information for Authors
- Springer Nature - Nature Photonics - Availability of Data and materials
- Public Library of Science Recommended Data Repositories
- European Molecular Biology Organisation Press Recommended Databases and Data Standards
- Springer Nature - Nature Genetics - Availability of Data and materials
- Cell Press - Trends In Plant Science - Information for Authors
- Cell Press - Molecular Cell - Information for Authors
- American Association for the Advancement of Science - Science - Editorial Policies; Data Materials Availability
- Springer Nature - Nature Chemical Biology - Availability of Data and materials
- Springer Nature Research Data Policy Type 2 (for life sciences)
- BioMed Central - Minimum Standards of Reporting Checklist
- Cell Press - Cell Host & Microbe - Information for Authors
- Elsevier Data Policy
- Cell Press - Cell Stem Cell - Information for Authors
- Cell Press - Trends In Biochemical Sciences - Instructions for Authors
- Springer Nature - Nature Chemistry - Availability of Data and materials
- Cold Spring Harbor Laboratory Press - Genes and Development - Instructions Regarding Data Submission
- Springer Nature - Nature Medicine - Availability of Data and materials
- Gates Open Research Data Guidelines
- Springer Nature Research Data Policy Type 1
- Springer Nature Research Data Policy Type 2
- Springer Nature Research Data Policy Type 3
- Springer Nature Research Data Policy Type 3 (for life sciences)
- Springer Nature - Nature Nanotechology - Availability of Data and materials
- Cell Press - Developmental Cell - Information for Authors
- Cell Press - Immunity - Information for Authors
Record Maintainer
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Funds
Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)
National Science Foundation (Government body)
U.S. Department of Energy (Government body)
National Institute of General Medical Sciences (NIGMS) (Government body)
The Wellcome Trust, UK (Charitable foundation)
US National Institutes of Health (NIH) (Research institute)
European Union (EU) (Government body)
National Bioscience Database Center (Research institute)
European Molecular Biology Laboratory (EMBL), Heidelberg, Germany (Consortium)
Maintains
