databases > DOI:10.25504/FAIRsharing.mtkc4
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ready EffectiveDB

General Information
The Effective database contains pre-calculated predictions of bacterial secreted proteins and of functional secretion systems. Effective bundles various tools to recognize Type III secretion signals, conserved binding sites of Type III chaperones, eukaryotic-like domains and subcellular targeting signals in the host. Beyond the analysis of arbitrary protein sequence collections, the new release of Effective also provides a "genome-mode", in which protein sequences from nearly complete genomes or metagenomic bins can be screened for the presence of three important secretion systems (type III, IV, VI).


Countries that developed this resource Austria , Canada

Created in 2010

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How to cite this record EffectiveDB; EffectiveDB; DOI:; Last edited: Jan. 8, 2019, 1:22 p.m.; Last accessed: Aug 03 2021 2:21 a.m.

This record is maintained by rattei  ORCID

Record added: Nov. 11, 2015, 10:39 a.m.
Record updated: Nov. 21, 2018, 11 a.m. by The FAIRsharing Team.

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Effective--a database of predicted secreted bacterial proteins.

Jehl MA,Arnold R,Rattei T
Nucleic Acids Res 2010

View Paper (PubMed) View Publication

EffectiveDB--updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.

Eichinger V,Nussbaumer T,Platzer A,Jehl MA,Arnold R,Rattei T
Nucleic Acids Res 2015

View Paper (PubMed) View Publication

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Grant Number(s)

  • DFG RA 1719/1-1 (Deutsche Forschungsgemeinschaft (DFG))

  • I 2191 (Austrian Science Fund (FWF), Austria)