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BioAssay Ontology

Abbreviation:BAO

Recommended

General Information

The BioAssay Ontology (BAO) describes chemical biology screening assays and their results including high-throughput screening (HTS) data for the purpose of categorizing assays and data analysis.

Homepage http://bioassayontology.org

Developed in United States

Created in 2009

Taxonomic range

Scope and data types

In the following recommendations:

How to cite this record FAIRsharing.org: BAO; BioAssay Ontology; DOI: https://doi.org/10.25504/FAIRsharing.mye76w; Last edited: July 18, 2018, 12:34 p.m.; Last accessed: Sep 24 2018 4:58 p.m.

This record is maintained by cchung ORCID

Record updated: July 18, 2018, 12:34 p.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/FAIRsharing.mye76w' by 'The FAIRsharing Team' at 12:34, 18 Jul 2018 (approved):

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In Collections

Cell Migration Standardisation Organisation

eTRIKS Standards Starter Pack

Support

General

wikipedia

BAO Life wiki

Additional Information

Contact	Stephan Schurer
Identifiers.org	MIR:00000597

External Links

Bioportal

http://bioportal.bioontology.org/ontologies/BAO

Tools

LINCS Data Portal	http://lincsportal.ccs.miami.edu/dcic-portal/
BAOSearch	http://baosearch.ccs.miami.edu/baosearch/

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Creative Commons Attribution 3.0 United States (CC BY 3.0 US)

Publications

Digitoxin metabolism by rat liver microsomes.

Schmoldt A,Benthe HF,Haberland G
Biochem Pharmacol 1975

View Paper (PubMed) View Publication

Evolving BioAssay Ontology (BAO): modularization, integration and applications.

Abeyruwan S,Vempati UD,Kucuk-McGinty H,Visser U,Koleti A,Mir A,Sakurai K,Chung C,Bittker JA,Clemons PA,Brudz S,Siripala A,Morales AJ,Romacker M,Twomey D,Bureeva S,Lemmon V,Schurer SC
J Biomed Semantics 2014

View Paper (PubMed) View Publication

BAO Ontology Display

View in BioPortal.

Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Web Ontology Language

Identifier Schemas

No identifier schema standards defined

Implementing Databases (1)

PubChem
PubChem is organized as three linked databases within the NCBI's Entrez information retrieval system. These are PubChem Substance, PubChem Compound, and PubChem BioAssay. PubChem also provides a fast chemical structure similarity search tool. More information about using each component database may be found using the links in the homepage.

Implementing Policies