standards > terminology artifact > DOI:10.25504/FAIRsharing.newa3z


ready Biological SPatial Ontology

Abbreviation: BSPO


General Information
An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces. These concepts can be used at multiple biological scales and in a diversity of taxa, including plants, animals and fungi. The BSPO is used to provide a source of anatomical location descriptors for logically defining anatomical entity classes in anatomy ontologies.

Homepage http://purl.bioontology.org/ontology/BSPO

Developed in Worldwide

Created in 2013



Scope and data types





How to cite this record FAIRsharing.org: BSPO; Biological SPatial Ontology; DOI: https://doi.org/10.25504/FAIRsharing.newa3z; Last edited: Feb. 22, 2018, 2:14 p.m.; Last accessed: Nov 13 2018 4:26 a.m.


Record updated: Oct. 6, 2016, 8:44 p.m. by The FAIRsharing Team.



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General

Additional Information


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    No tools defined


Schemas

No XSD schemas defined


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Conditions of Use

Applies to: Data use




Publications

Nose to tail, roots to shoots: spatial descriptors for phenotypic diversity in the Biological Spatial Ontology.

Dahdul WM,Cui H,Mabee PM,Mungall CJ,Osumi-Sutherland D,Walls RL,Haendel MA
J Biomed Semantics 2014

View Paper (PubMed) View Publication


Related Standards

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No guidelines defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined


Implementing Databases (2)
The Zebrafish Information Network
The Zebrafish Information Network, ZFIN, serves as the primary community database resource for the laboratory use of zebrafish. We develop and support integrated zebrafish genetic, genomic, developmental and physiological information and link this information extensively to corresponding data in other model organism and human databases.

OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.

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