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ISA-TAB-Nano

General Information

ISA-TAB-Nano specifies the format for representing and sharing information about nanomaterials, small molecules and biological specimens along with their assay characterization data (including metadata, and summary data) using spreadsheet or TAB-delimited files.

Homepage https://wiki.nci.nih.gov/display/ICR/ISA-TAB-Nano

Countries that developed this resource United States

Created in 2012

Taxonomic range

Homo sapiens

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: ISA-TAB-Nano; ISA-TAB-Nano; DOI: https://doi.org/10.25504/FAIRsharing.njqq5b; Last edited: April 27, 2021, 2:11 p.m.; Last accessed: Sep 20 2021 9:46 p.m.

Publication for citation ISA-TAB-Nano: a specification for sharing nanomaterial research data in spreadsheet-based format. Thomas DG, Gaheen S, Harper SL, Fritts M, Klaessig F, Hahn-Dantona E, Paik D, Pan S, Stafford GA, Freund ET, Klemm JD, Baker NA.; BMC biotechnology ; 2013; 10.1186/1472-6750-13-2;

This record is maintained by heiskame

Record updated: April 16, 2021, 5:32 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.njqq5b' by 'The FAIRsharing Team' at 17:32, 16 Apr 2021 (approved):

	'organizations' has been modified:
		Before:
			Air Force Research Laboratory, USA|http://www.wpafb.af.mil/afrl|Funds
			ELIXIR Italy|http://elixir-italy.org|Funds
			The National Institute of Environmental Health Sciences, NIH, USA|http://www.niehs.nih.gov/|Funds
			National Cancer Institute, Rockville, MD, USA|https://ncifrederick.cancer.gov/Default.aspx|Undefined
		After:
			Air Force Research Laboratory, USA|http://www.wpafb.af.mil/afrl|Funds
			ELIXIR Italy|http://elixir-italy.org|Funds
			The National Institute of Environmental Health Sciences, NIH, USA|http://www.niehs.nih.gov/|Funds
			National Cancer Institute, Rockville, MD, USA|https://ncifrederick.cancer.gov/Default.aspx|Maintains
		Added:
			National Cancer Institute, Rockville, MD, USA|https://ncifrederick.cancer.gov/Default.aspx|Maintains
		Removed:
			National Cancer Institute, Rockville, MD, USA|https://ncifrederick.cancer.gov/Default.aspx|Undefined

Edits to 'https://fairsharing.org/FAIRsharing.njqq5b' by 'The FAIRsharing Team' at 08:24, 03 Mar 2020 (approved):

	'user_defined_tags' has been modified:
		Before:
		After:
			Data standards
		Added:
			Data standards
		Removed:

	'supportLinks' has been modified:
		Before:
		After:
			online documentation|https://wiki.nci.nih.gov/download/attachments/253887742/ISA-TAB-Nano_Overview_508_c.pptx
		Added:
			online documentation|https://wiki.nci.nih.gov/download/attachments/253887742/ISA-TAB-Nano_Overview_508_c.pptx
		Removed:

	'contactORCID' has been modified:
		Before: 
		After: 0000-0001-6862-9196

Edits to 'https://fairsharing.org/FAIRsharing.njqq5b' by 'The FAIRsharing Team' at 20:55, 30 Oct 2018 (approved):

	'domains' has been modified:
		Before:
			Assay
			Intervention design
			Life Science
			Nanoparticle
			Nanotechnology
		After:
			Assay
			Biomedical Science
			Cell line
			Intervention design
			Life Science
			Nanoparticle
			Nanotechnology
			Oncology
			Resource metadata
			Tissue
		Added:
			Biomedical Science
			Cell line
			Oncology
			Resource metadata
			Tissue
		Removed:

	'organizations' has been modified:
		Before:
			Air Force Research Laboratory, USA|http://www.wpafb.af.mil/afrl|Funds
			ELIXIR IIB, Italy|http://elixir-italy.org|Funds
			The National Institute of Environmental Health Sciences, NIH, USA|http://www.niehs.nih.gov|Funds
		After:
			Air Force Research Laboratory, USA|http://www.wpafb.af.mil/afrl|Funds
			ELIXIR IIB, Italy|http://elixir-italy.org|Funds
			The National Institute of Environmental Health Sciences, NIH, USA|http://www.niehs.nih.gov|Funds
			National Cancer Institute, US|http://www.cancer.gov|Undefined
		Added:
			National Cancer Institute, US|http://www.cancer.gov|Undefined
		Removed:

	'taxonomies' has been modified:
		Before:
			Homo sapiens
			Rattus norvegicus
		After:
			Homo sapiens
		Added:
		Removed:
			Rattus norvegicus

	'related_standards' has been modified:
		Before:
			Investigation Study Assay Tabular
		After:
			Investigation Study Assay Tabular
			NanoParticle Ontology
		Added:
			NanoParticle Ontology
		Removed:

	'yearOfCreation' has been modified:
		Before: None
		After: 2012

Edits to 'https://fairsharing.org/FAIRsharing.njqq5b' by 'The FAIRsharing Team' at 13:56, 25 Oct 2018 (approved):

	'organizations' has been modified:
		Before:
			Air Force Research Laboratory, USA|http://www.wpafb.af.mil/afrl|Funds
			ELIXIR IIB, Italy|http://elixir-italy.org|Funds
			NIEHS NIH HHS||Funds
			The National Institute of Environmental Health Sciences, NIH, USA|http://www.niehs.nih.gov|Funds
		After:
			Air Force Research Laboratory, USA|http://www.wpafb.af.mil/afrl|Funds
			ELIXIR IIB, Italy|http://elixir-italy.org|Funds
			The National Institute of Environmental Health Sciences, NIH, USA|http://www.niehs.nih.gov|Funds
		Added:
		Removed:
			NIEHS NIH HHS||Funds

	'miriam_id' has been modified:
		Before: None
		After:

In Collections

ISO/CD 20691 Collection - DRAFT

Support

General

online documentation

Powerpoint presentation

Additional Information

Contact

Mervi Heiskanen ORCID

Tools

No tools defined

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Publications

ISA-TAB-Nano: a specification for sharing nanomaterial research data in spreadsheet-based format.

Thomas DG, Gaheen S, Harper SL, Fritts M, Klaessig F, Hahn-Dantona E, Paik D, Pan S, Stafford GA, Freund ET, Klemm JD, Baker NA.
BMC biotechnology 2013

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

NanoParticle Ontology

Models and Formats

Investigation Study Assay Tabular

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases (3)

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NASA GeneLab expands scientists’ access to experiments that explore the molecular response of terrestrial biology to spaceflight environments. The vast amounts of raw data generated by experiments aboard the International Space Station are being made available to a worldwide community of scientists and computational researchers.

DataverseNO
DataverseNO (https://dataverse.no/) is a national, generic repository for open research data, owned and operated by UiT The Arctic University of Norway. DataverseNO is aligned with the FAIR Guiding Principles for scientific data management and stewardship. The technical infrastructure of the repository is based on the open source application Dataverse, which is developed by an international developer and user community led by Harvard University. DataverseNO is CoreTrustSeal certified.

NanoCommons Knowledge Base
The NanoCommons Knowledge Base is a data source provided by the NanoCommons project. It is based on the BioXM TM Knowledge Management Environment, developed over the last 15 years by Biomax Informatics AG and applied in multiple collaborative research projects and commercial environments. This database requires registration. NanoCommons provides a community framework and infrastructure for reproducible science and in-silico workflows for nanomaterials safety assessment

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by heiskame

Funds

Air Force Research Laboratory, USA (Government body)
ELIXIR Italy (Government body)
The National Institute of Environmental Health Sciences, NIH, USA (Government body)

Maintains

National Cancer Institute, Rockville, MD, USA (Government body)

Grant Number(s)

ES016896-01 (The National Institute of Environmental Health Sciences, NIH, USA)
FA8650-05-1-5041 (Air Force Research Laboratory, USA)
P30 ES03850 (The National Institute of Environmental Health Sciences, NIH, USA)
R01 GM069702 (ELIXIR Italy)
U01 NS073457 (ELIXIR Italy)
U54 CA119367 (ELIXIR Italy)
U54 CA151459 (ELIXIR Italy)
U54 HG004028 (ELIXIR Italy)

ISA-TAB-Nano

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