databases > DOI:10.25504/FAIRsharing.oaLCAI

ready PathosSystems Resource Integration Center Repository

Abbreviation:PATRIC

General Information
PATRIC is part of the Bacterial Bioinformatics Resource Center, and is an information system designed to support the biomedical research community’s work on bacterial infectious diseases via integration of vital pathogen information with rich data and analysis tools. PATRIC provides an interface for biologists to discover data and information and conduct comprehensive comparative genomics and other analyses. PATRIC includes over 250 000 publicly available microbial genomes and tools for comparative analysis.

Homepage https://www.patricbrc.org/

Countries that developed this resource United States

Created in 2007

Taxonomic range





How to cite this record FAIRsharing.org: PATRIC; PathosSystems Resource Integration Center Repository; DOI: https://doi.org/10.25504/FAIRsharing.oaLCAI; Last edited: July 31, 2020, 2:04 p.m.; Last accessed: Feb 28 2021 1:06 a.m.


This record is maintained by patric

Record added: May 11, 2020, 1:18 p.m.
Record updated: July 31, 2020, 2:04 p.m. by The FAIRsharing Team.



In Collections
NIH-supported data repositories

Support

General

help User Guides
online documentation About PATRIC
training Tutorials
twitter @PATRICBRC

Additional Information

Contact General Contact

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Release

Download (FTP) ftp://ftp.patricbrc.org/

Data Access

Browse Bacteria https://www.patricbrc.org/view/Taxonomy/2
Browse Archaea https://www.patricbrc.org/view/Taxonomy/2157
Browse Phages https://www.patricbrc.org/view/Taxonomy/10239
Browse Eukaryotic Hosts https://www.patricbrc.org/view/Host/?eq(taxon_lineage_ids,2759)#view_t ...



Publications

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.

Wattam AR,Davis JJ,Assaf R et al.
Nucleic Acids Res 2016

View Paper (PubMed) View Publication

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.

Davis JJ,Wattam AR,Aziz RK et al.
Nucleic Acids Res 2019

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is maintained by patric

Maintains