PathosSystems Resource Integration Center Repository
Abbreviation:PATRIC
Homepage https://www.patricbrc.org/
Countries that developed this resource United States
Created in 2007
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: PATRIC; PathosSystems Resource Integration Center Repository; DOI: https://doi.org/10.25504/FAIRsharing.oaLCAI; Last edited: July 31, 2020, 2:04 p.m.; Last accessed: Feb 28 2021 1:06 a.m.
Record added: May 11, 2020, 1:18 p.m.
Record updated:
July 31, 2020, 2:04 p.m. by The FAIRsharing Team.
help | User Guides |
online documentation | About PATRIC |
training | Tutorials |
@PATRICBRC |
Additional Information
Contact | General Contact |
Conditions of Use
Data Release
Download (FTP) | ftp://ftp.patricbrc.org/ |
Data Access
Browse Bacteria | https://www.patricbrc.org/view/Taxonomy/2 |
Browse Archaea | https://www.patricbrc.org/view/Taxonomy/2157 |
Browse Phages | https://www.patricbrc.org/view/Taxonomy/10239 |
Browse Eukaryotic Hosts | https://www.patricbrc.org/view/Host/?eq(taxon_lineage_ids,2759)#view_t ... |
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.
Wattam AR,Davis JJ,Assaf R et al.
Nucleic Acids Res 2016
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.
Davis JJ,Wattam AR,Aziz RK et al.
Nucleic Acids Res 2019
Reporting Guidelines
No guidelines defined
Terminology Artifacts
Models and Formats
No syntax standards defined
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
- IntAct molecular interaction database
- Molecular INTeraction database
- Search Tool for Interactions of Chemicals
- TTD, Therapeutic Target Database
- Virulence Factor Database
- Virus Pathogen Database and Analysis Resource
- Comparative Toxicogenomics Database
- Influenza Research Database
- DrugBank
- ArrayExpress
- PRoteomics IDEntifications database
- TriTrypDB
- Conserved Domain Database
- Gene Expression Omnibus
- Molecular Modeling Database (MMDB)
- PubMed
- Reference Sequence Database
- Biological General Repository for Interaction Datasets
- RCSB Protein Data Bank
- UniProt Knowledgebase
- Database of Interacting Proteins
- Kyoto Encyclopedia of Genes and Genomes
- NCBI BioProject
- NIH Human Microbiome Project
- Immune Epitope Database
- Comprehensive Antibiotic Resistance Database
This record is not implemented by any policy.
Record Maintainer
This record is maintained by patric
Maintains
University of Chicago, Chicago, Illinois, USA (University)
Biocomplexity Institute and Initiative, University of Virginia, Charlottesville, VA, USA (Research institute)