Edits to 'https://fairsharing.org/FAIRsharing.pzvw40' by 'The FAIRsharing Team' at 14:06, 23 Feb 2021 (approved):
'licences' has been modified:
Before:
Stanford University Terms of Use|https://www.stanford.edu/site/terms/|Data
After:
Stanford University Terms of Use|https://www.stanford.edu/site/terms/|Data
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Added:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Removed:
'description' has been modified:
Before: The Saccharomyces Genome Database (SGD) collects and organizes information about the molecular biology and genetics of the yeast Saccharomyces cerevisiae. SGD contains a variety of biological information and tools with which to search and analyze it.
After: The Saccharomyces Genome Database (SGD) provides comprehensive integrated biological information for the budding yeast Saccharomyces cerevisiae along with search and analysis tools to explore these data, enabling the discovery of functional relationships between sequence and gene products in fungi and higher organisms.
'publications' has been modified:
Before:
Standardized description of scientific evidence using the Evidence Ontology (ECO).|Chibucos MC., Mungall CJ., Balakrishnan R., Christie KR., Huntley RP., White O., Blake JA., Lewis SE., Giglio M.|Database (Oxford).|2014
Saccharomyces Genome Database provides new regulation data.|Costanzo MC., Engel SR., Wong ED., Lloyd P., Karra K., Chan ET., Weng S., Paskov KM., Roe GR., Binkley G., Hitz BC., Cherry JM.|Nucleic Acids Res.|2014
The reference genome sequence of Saccharomyces cerevisiae: then and now.|Engel SR., Dietrich FS., Fisk DG., Binkley G., Balakrishnan R., Costanzo MC., Dwight SS., Hitz BC., Karra K., Nash RS., Weng S., Wong ED., Lloyd P., Skrzypek MS., Miyasato SR., Simison M., Cherry JM.|G3 (Bethesda).|2014
A guide to best practices for Gene Ontology (GO) manual annotation.|Balakrishnan R., Harris MA., Huntley R., Van Auken K., Cherry JM.|Database (Oxford).|2013
The new modern era of yeast genomics: community sequencing and the resulting annotation of multiple Saccharomyces cerevisiae strains at the Saccharomyces Genome Database.|Engel SR., Cherry JM.|Database (Oxford).|2013
The YeastGenome app: the Saccharomyces Genome Database at your fingertips.|Wong ED., Karra K., Hitz BC., Hong EL., Cherry JM.|Database (Oxford).|2013
YeastMine - An integrated data warehouse for S. cerevisiae data as a multi-purpose tool-kit.|Balakrishnan R., Park J., Karra K., Hitz BC., Binkley G., Hong EL., Sullivan J., Micklem G., Cherry JM.|Database (Oxford).|2012
Considerations for creating and annotating the budding yeast Genome Map at SGD: a progress report.|Chan ET., Cherry JM.|Database (Oxford).|2012
CvManGO, a method for leveraging computational predictions to improve literature-based Gene Ontology annotations.|Park J., Costanzo MC., Balakrishnan R., Cherry JM., Hong EL.|Database (Oxford).|2012
Saccharomyces Genome Database: the genomics resource of budding yeast.|Cherry JM., Hong EL., Amundsen C., Balakrishnan R., Binkley G., Chan ET., Christie KR., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hitz BC., Karra K., Krieger CJ., Miyasato SR., Nash RS., Park J., Skrzypek MS., Simison M., Weng S., Wong ED.|Nucleic Acids Res.|2012
Using computational predictions to improve literature-based Gene Ontology annotations: a feasibility study. |Costanzo MC., Park J., Balakrishnan R., Cherry JM., Hong EL.|Database (Oxford).|2011
Saccharomyces Genome Database provides mutant phenotype data.|Engel SR., Balakrishnan R., Binkley G., Christie KR., Costanzo MC., Dwight SS., Fisk DG., Hirschman JE., Hitz BC., Hong EL., Krieger CJ., Livstone MS., Miyasato SR., Nash R., Oughtred R., Park J., Skrzypek MS., Weng S., Wong ED., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res. |2010
Functional annotations for the Saccharomyces cerevisiae genome: the knowns and the known unknowns.|Christie KR., Hong EL., Cherry JM.|Trends Microbiol.|2009
Using Model Organism Databases (MODs).|Engel SR.|Current Protocols Essential Laboratory Techniques|2009
New mutant phenotype data curation system in the Saccharomyces Genome Database.|Costanzo MC., Skrzypek MS., Nash R., Wong E., Binkley G, Engel SR., Hitz B., Hong EL., Cherry JM., and the Saccharomyces Genome Database Project.|Database (Oxford).|2009
Gene Ontology annotations at SGD: new data sources and annotation methods.|Hong EL., Balakrishnan R., Dong Q., Christie KR., Park J., Binkley G., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hitz BC., Krieger CJ., Livstone MS,. Miyasato SR., Nash RS., Oughtred R., Skrzypek MS., Weng S., Wong ED., Zhu KK., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res.|2008
Expanded protein information at SGD: new pages and proteome browser.|Nash R., Weng S., Hitz B., Balakrishnan R., Christie KR., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hong EL., Livstone MS., Oughtred R., Park J, Skrzypek M., Theesfeld CL., Binkley G., Dong Q., Lane C., Miyasato S., Sethuraman A., Schroeder M., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res.|2007
Saccharomyces cerevisiae S288C genome annotation: a working hypothesis.|Fisk DG., Ball CA., Dolinski K., Engel SR., Hong EL., Issel-Tarver L., Schwartz K., Sethuraman A., Botstein D., Cherry JM.|Yeast.|2006
Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome.|Hirschman JE., Balakrishnan R., Christie KR., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hong EL., Livstone MS., Nash R., Park J., Oughtred R., Skrzypek M., Starr B., Theesfeld CL., Williams J., Andrada R., Binkley G., Dong Q., Lane C., Miyasato S., Sethuraman A., Schroeder M., Thanawala MK., Weng S., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res.|2006
Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD).|Balakrishnan R., Christie KR., Costanzo MC., Dolinski K., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hong EL., Nash R., Oughtred R., Skrzypek M., Theesfeld CL., Binkley G., Dong Q., Lane C., Sethuraman A., Weng S., Botstein D., Cherry JM.|Nucleic Acids Res.|2005
Saccharomyces genome database: underlying principles and organisation. |Dwight SS., Balakrishnan R., Christie KR., Costanzo MC., Dolinski K., Engel SR., Feierbach B., Fisk DG., Hirschman J., Hong EL., Issel-Tarver L., Nash RS., Sethuraman A., Starr B., Theesfeld CL., Andrada R., Binkley G., Dong Q., Lane C., Schroeder M., Weng S., Botstein D., Cherry JM.|Brief Bioinform.|2004
Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.|Christie KR., Weng S., Balakrishnan R., Costanzo MC., Dolinski K., Dwight SS., Engel SR., Feierbach B., Fisk DG., Hirschman JE., Hong EL., Issel-Tarver L., Nash R., Sethuraman A., Starr B., Theesfeld CL., Andrada R., Binkley G., Dong Q., Lane C., Schroeder M., Botstein D., Cherry JM.|Nucleic Acids Res.|2004
Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins.|Weng S., Dong Q., Balakrishnan R., Christie K., Costanzo M., Dolinski K., Dwight SS., Engel S., Fisk DG., Hong E., Issel-Tarver L., Sethuraman A., Theesfeld C., Andrada R., Binkley G., Lane C., Schroeder M., Botstein D., Cherry JM.|Nucleic Acids Res.|2003
Saccharomyces Genome Database|Issel-Tarver L., Christie KR., Dolinski K., Andrada R., Balakrishnan R., Ball CA., Binkley G., Dong S., Dwight SS., Fisk DG., Harris M., Schroeder M., Sethuraman A., Tse K., Weng S., Botstein D., Cherry JM.|Methods Enzymol.|2002
Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO).|Dwight SS., Harris MA., Dolinski K., Ball CA., Binkley G., Christie KR., Fisk DG., Issel-Tarver L., Schroeder M., Sherlock G., Sethuraman A., Weng S., Botstein D., Cherry JM.|Nucleic Acids Res.|2002
From one to many: expanding the Saccharomyces cerevisiae reference genome panel.|Engel SR., Weng S., Binkley G., Paskov K., Song G., Cherry JM.|Database (Oxford).|2016
The Saccharomyces Genome Database Variant Viewer.|Sheppard TK., Hitz BC., Engel SR., Song G., Balakrishnan R., Binkley G., Costanzo MC., Dalusag KS., Demeter J., Hellerstedt ST., Karra K., Nash RS., Paskov KM., Skrzypek MS., Weng S., Wong ED., Cherry JM.| Nucleic Acids Res.|2016
The Saccharomyces Genome Database: A Tool for Discovery.|Cherry JM.|Cold Spring Harb Protoc.|2015
The Saccharomyces Genome Database: Exploring Genome Features and Their Annotations.|Cherry JM.|Cold Spring Harb Protoc.|2015
Expanding yeast knowledge online.|Dolinski K., Ball CA., Chervitz SA., Dwight SS., Harris MA., Roberts S., Roe T., Cherry JM., Botstein D.|Yeast.|1998
The Saccharomyces Genome Database: Exploring Biochemical Pathways and Mutant Phenotypes.|Cherry JM.|Cold Spring Harb Protoc.|2015
Biocuration at the Saccharomyces Genome Database.|Skrzypek MS., Nash RS.|Genesis.|2015
AGAPE (Automated Genome Analysis PipelinE) for Pan-Genome Analysis of Saccharomyces cerevisiae.|Song G., Dickins BJ., Demeter J., Engel S., Dunn B., Cherry JM.|PLoS One.|2015
The complex portal - an encyclopaedia of macromolecular complexes.|Meldal BH., Forner-Martinez O., Costanzo MC., Dana J., Demeter J., Dumousseau M., Dwight SS., Gaulton A., Licata L., Melidoni AN., Ricard-Blum S., Roechert B., Skyzypek MS., Tiwari M., Velankar S., Wong ED., Hermjakob H., Orchard S.|Nucleic Acids Res.|2014
The Saccharomyces Genome Database: Gene Product Annotation of Function, Process, and Component.|Cherry JM.|Cold Spring Harb Protoc.|2015
The Saccharomyces Genome Database: Advanced Searching Methods and Data Mining.|Cherry JM.|Cold Spring Harb Protoc.|2015
Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data.|Ball CA., Jin H., Sherlock G., Weng S., Matese JC., Andrada R., Binkley G., Dolinski K., Dwight SS., Harris MA., Issel-Tarver L., Schroeder M., Botstein D., Cherry JM.|Nucleic Acids Res.|2001
SGD: Saccharomyces Genome Database.|Cherry JM., Adler C., Ball C., Chervitz SA., Dwight SS., Hester ET., Jia Y., Juvik G., Roe T., Schroeder M., Weng S., Botstein D.|Nucleic Acids Res.|1998
Comparison of the complete protein sets of worm and yeast: orthology and divergence.|Chervitz SA., Aravind L., Sherlock G., Ball CA., Koonin EV., Dwight SS., Harris MA., Dolinski K., Mohr S., Smith T., Weng S., Cherry JM., Botstein D.|Science.|1998
Yeast as a model organism.|Botstein D., Chervitz SA., Cherry JM.|Science.|1997
Integrating functional genomic information into the Saccharomyces genome database.|Ball CA., Dolinski K., Dwight SS., Harris MA., Issel-Tarver L., Kasarskis A., Scafe CR., Sherlock G., Binkley G., Jin H., Kaloper M., Orr SD., Schroeder M., Weng S., Zhu Y., Botstein D., Cherry JM.|Nucleic Acids Res.|2000
Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure.|Chervitz SA., Hester ET., Ball CA., Dolinski K., Dwight SS., Harris MA., Juvik G., Malekian A., Roberts S., Roe T., Scafe C., Schroeder M., Sherlock G., Weng S., Zhu Y., Cherry JM., Botstein D.|Nucleic Acids Res.|1999
Molecular linguistics: extracting information from gene and protein sequences.|Botstein D., Cherry JM.|Proc Natl Acad Sci U S A.|1997
Genetic and physical maps of Saccharomyces cerevisiae.|Cherry JM., Ball C., Weng S., Juvik G., Schmidt R., Adler C., Dunn B., Dwight S., Riles L., Mortimer RK., Botstein D.|Nature.|1997
Genetic nomenclature guide. Saccharomyces cerevisiae.|Cherry JM.|Trends Genet.|1995
After:
Standardized description of scientific evidence using the Evidence Ontology (ECO).|Chibucos MC., Mungall CJ., Balakrishnan R., Christie KR., Huntley RP., White O., Blake JA., Lewis SE., Giglio M.|Database (Oxford).|2014
A guide to best practices for Gene Ontology (GO) manual annotation.|Balakrishnan R., Harris MA., Huntley R., Van Auken K., Cherry JM.|Database (Oxford).|2013
CvManGO, a method for leveraging computational predictions to improve literature-based Gene Ontology annotations.|Park J., Costanzo MC., Balakrishnan R., Cherry JM., Hong EL.|Database (Oxford).|2012
Saccharomyces Genome Database: the genomics resource of budding yeast.|Cherry JM., Hong EL., et al., |Nucleic Acids Res.|2012
Using Model Organism Databases (MODs).|Engel SR.|Current Protocols Essential Laboratory Techniques|2009
New mutant phenotype data curation system in the Saccharomyces Genome Database.|Costanzo MC., Skrzypek MS., Nash R., Wong E., Binkley G, Engel SR., Hitz B., Hong EL., Cherry JM., and the Saccharomyces Genome Database Project.|Database (Oxford).|2009
Expanded protein information at SGD: new pages and proteome browser.|Nash R., Weng S., et al.,|Nucleic Acids Res.|2007
Saccharomyces cerevisiae S288C genome annotation: a working hypothesis.|Fisk DG., Ball CA., Dolinski K., Engel SR., Hong EL., Issel-Tarver L., Schwartz K., Sethuraman A., Botstein D., Cherry JM.|Yeast.|2006
Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome.|Hirschman JE., Balakrishnan R., et al.,|Nucleic Acids Res.|2006
Saccharomyces genome database: underlying principles and organisation. |Dwight SS., Balakrishnan R., et al.,|Brief Bioinform.|2004
Saccharomyces Genome Database provides new regulation data.|Costanzo MC., Engel SR., Wong ED., Lloyd P., Karra K., Chan ET., Weng S., Paskov KM., Roe GR., Binkley G., Hitz BC., Cherry JM.|Nucleic Acids Res.|2014
The reference genome sequence of Saccharomyces cerevisiae: then and now.|Engel SR., Dietrich FS., Fisk DG., Binkley G., Balakrishnan R., Costanzo MC., Dwight SS., Hitz BC., Karra K., Nash RS., Weng S., Wong ED., Lloyd P., Skrzypek MS., Miyasato SR., Simison M., Cherry JM.|G3 (Bethesda).|2014
The new modern era of yeast genomics: community sequencing and the resulting annotation of multiple Saccharomyces cerevisiae strains at the Saccharomyces Genome Database.|Engel SR., Cherry JM.|Database (Oxford).|2013
The YeastGenome app: the Saccharomyces Genome Database at your fingertips.|Wong ED., Karra K., Hitz BC., Hong EL., Cherry JM.|Database (Oxford).|2013
YeastMine - An integrated data warehouse for S. cerevisiae data as a multi-purpose tool-kit.|Balakrishnan R., Park J., Karra K., Hitz BC., Binkley G., Hong EL., Sullivan J., Micklem G., Cherry JM.|Database (Oxford).|2012
Considerations for creating and annotating the budding yeast Genome Map at SGD: a progress report.|Chan ET., Cherry JM.|Database (Oxford).|2012
Using computational predictions to improve literature-based Gene Ontology annotations: a feasibility study. |Costanzo MC., Park J., Balakrishnan R., Cherry JM., Hong EL.|Database (Oxford).|2011
Saccharomyces Genome Database provides mutant phenotype data.|Engel SR., Balakrishnan R., et al.,|Nucleic Acids Res. |2010
Functional annotations for the Saccharomyces cerevisiae genome: the knowns and the known unknowns.|Christie KR., Hong EL., Cherry JM.|Trends Microbiol.|2009
Gene Ontology annotations at SGD: new data sources and annotation methods.|Hong EL., Balakrishnan R., et al.,|Nucleic Acids Res.|2008
Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD).|Balakrishnan R., Christie KR., Costanzo MC., Dolinski K., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hong EL., Nash R., Oughtred R., Skrzypek M., Theesfeld CL., Binkley G., Dong Q., Lane C., Sethuraman A., Weng S., Botstein D., Cherry JM.|Nucleic Acids Res.|2005
Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.|Christie KR., Weng S., et al.,|Nucleic Acids Res.|2004
From one to many: expanding the Saccharomyces cerevisiae reference genome panel.|Engel SR., Weng S., Binkley G., Paskov K., Song G., Cherry JM.|Database (Oxford).|2016
Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins.|Weng S., Dong Q., Balakrishnan R., Christie K., Costanzo M., Dolinski K., Dwight SS., Engel S., Fisk DG., Hong E., Issel-Tarver L., Sethuraman A., Theesfeld C., Andrada R., Binkley G., Lane C., Schroeder M., Botstein D., Cherry JM.|Nucleic Acids Res.|2003
Saccharomyces Genome Database|Issel-Tarver L., Christie KR., Dolinski K., Andrada R., Balakrishnan R., Ball CA., Binkley G., Dong S., Dwight SS., Fisk DG., Harris M., Schroeder M., Sethuraman A., Tse K., Weng S., Botstein D., Cherry JM.|Methods Enzymol.|2002
The Saccharomyces Genome Database: A Tool for Discovery.|Cherry JM.|Cold Spring Harb Protoc.|2015
Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO).|Dwight SS., Harris MA., Dolinski K., Ball CA., Binkley G., Christie KR., Fisk DG., Issel-Tarver L., Schroeder M., Sherlock G., Sethuraman A., Weng S., Botstein D., Cherry JM.|Nucleic Acids Res.|2002
The Saccharomyces Genome Database Variant Viewer.|Sheppard TK., Hitz BC., Engel SR., Song G., Balakrishnan R., Binkley G., Costanzo MC., Dalusag KS., Demeter J., Hellerstedt ST., Karra K., Nash RS., Paskov KM., Skrzypek MS., Weng S., Wong ED., Cherry JM.| Nucleic Acids Res.|2016
The Saccharomyces Genome Database: Exploring Genome Features and Their Annotations.|Cherry JM.|Cold Spring Harb Protoc.|2015
Genetic and physical maps of Saccharomyces cerevisiae.|Cherry JM., Ball C., Weng S., Juvik G., Schmidt R., Adler C., Dunn B., Dwight S., Riles L., Mortimer RK., Botstein D.|Nature.|1997
Expanding yeast knowledge online.|Dolinski K., Ball CA., Chervitz SA., Dwight SS., Harris MA., Roberts S., Roe T., Cherry JM., Botstein D.|Yeast.|1998
The Saccharomyces Genome Database: Exploring Biochemical Pathways and Mutant Phenotypes.|Cherry JM.|Cold Spring Harb Protoc.|2015
Biocuration at the Saccharomyces Genome Database.|Skrzypek MS., Nash RS.|Genesis.|2015
AGAPE (Automated Genome Analysis PipelinE) for Pan-Genome Analysis of Saccharomyces cerevisiae.|Song G., Dickins BJ., Demeter J., Engel S., Dunn B., Cherry JM.|PLoS One.|2015
The complex portal - an encyclopaedia of macromolecular complexes.|Meldal BH., Forner-Martinez O., Costanzo MC., Dana J., Demeter J., Dumousseau M., Dwight SS., Gaulton A., Licata L., Melidoni AN., Ricard-Blum S., Roechert B., Skyzypek MS., Tiwari M., Velankar S., Wong ED., Hermjakob H., Orchard S.|Nucleic Acids Res.|2014
The Saccharomyces Genome Database: Gene Product Annotation of Function, Process, and Component.|Cherry JM.|Cold Spring Harb Protoc.|2015
The Saccharomyces Genome Database: Advanced Searching Methods and Data Mining.|Cherry JM.|Cold Spring Harb Protoc.|2015
Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data.|Ball CA., Jin H., Sherlock G., Weng S., Matese JC., Andrada R., Binkley G., Dolinski K., Dwight SS., Harris MA., Issel-Tarver L., Schroeder M., Botstein D., Cherry JM.|Nucleic Acids Res.|2001
SGD: Saccharomyces Genome Database.|Cherry JM., Adler C., Ball C., Chervitz SA., Dwight SS., Hester ET., Jia Y., Juvik G., Roe T., Schroeder M., Weng S., Botstein D.|Nucleic Acids Res.|1998
Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure.|Chervitz SA., Hester ET., Ball CA., Dolinski K., Dwight SS., Harris MA., Juvik G., Malekian A., Roberts S., Roe T., Scafe C., Schroeder M., Sherlock G., Weng S., Zhu Y., Cherry JM., Botstein D.|Nucleic Acids Res.|1999
Comparison of the complete protein sets of worm and yeast: orthology and divergence.|Chervitz SA., Aravind L., Sherlock G., Ball CA., Koonin EV., Dwight SS., Harris MA., Dolinski K., Mohr S., Smith T., Weng S., Cherry JM., Botstein D.|Science.|1998
Yeast as a model organism.|Botstein D., Chervitz SA., Cherry JM.|Science.|1997
Integrating functional genomic information into the Saccharomyces genome database.|Ball CA., Dolinski K., Dwight SS., Harris MA., Issel-Tarver L., Kasarskis A., Scafe CR., Sherlock G., Binkley G., Jin H., Kaloper M., Orr SD., Schroeder M., Weng S., Zhu Y., Botstein D., Cherry JM.|Nucleic Acids Res.|2000
Molecular linguistics: extracting information from gene and protein sequences.|Botstein D., Cherry JM.|Proc Natl Acad Sci U S A.|1997
Genetic nomenclature guide. Saccharomyces cerevisiae.|Cherry JM.|Trends Genet.|1995
Added:
Saccharomyces Genome Database: the genomics resource of budding yeast.|Cherry JM., Hong EL., et al., |Nucleic Acids Res.|2012
Expanded protein information at SGD: new pages and proteome browser.|Nash R., Weng S., et al.,|Nucleic Acids Res.|2007
Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome.|Hirschman JE., Balakrishnan R., et al.,|Nucleic Acids Res.|2006
Saccharomyces genome database: underlying principles and organisation. |Dwight SS., Balakrishnan R., et al.,|Brief Bioinform.|2004
Saccharomyces Genome Database provides mutant phenotype data.|Engel SR., Balakrishnan R., et al.,|Nucleic Acids Res. |2010
Gene Ontology annotations at SGD: new data sources and annotation methods.|Hong EL., Balakrishnan R., et al.,|Nucleic Acids Res.|2008
Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.|Christie KR., Weng S., et al.,|Nucleic Acids Res.|2004
Removed:
Saccharomyces Genome Database: the genomics resource of budding yeast.|Cherry JM., Hong EL., Amundsen C., Balakrishnan R., Binkley G., Chan ET., Christie KR., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hitz BC., Karra K., Krieger CJ., Miyasato SR., Nash RS., Park J., Skrzypek MS., Simison M., Weng S., Wong ED.|Nucleic Acids Res.|2012
Saccharomyces Genome Database provides mutant phenotype data.|Engel SR., Balakrishnan R., Binkley G., Christie KR., Costanzo MC., Dwight SS., Fisk DG., Hirschman JE., Hitz BC., Hong EL., Krieger CJ., Livstone MS., Miyasato SR., Nash R., Oughtred R., Park J., Skrzypek MS., Weng S., Wong ED., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res. |2010
Gene Ontology annotations at SGD: new data sources and annotation methods.|Hong EL., Balakrishnan R., Dong Q., Christie KR., Park J., Binkley G., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hitz BC., Krieger CJ., Livstone MS,. Miyasato SR., Nash RS., Oughtred R., Skrzypek MS., Weng S., Wong ED., Zhu KK., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res.|2008
Expanded protein information at SGD: new pages and proteome browser.|Nash R., Weng S., Hitz B., Balakrishnan R., Christie KR., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hirschman JE., Hong EL., Livstone MS., Oughtred R., Park J, Skrzypek M., Theesfeld CL., Binkley G., Dong Q., Lane C., Miyasato S., Sethuraman A., Schroeder M., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res.|2007
Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome.|Hirschman JE., Balakrishnan R., Christie KR., Costanzo MC., Dwight SS., Engel SR., Fisk DG., Hong EL., Livstone MS., Nash R., Park J., Oughtred R., Skrzypek M., Starr B., Theesfeld CL., Williams J., Andrada R., Binkley G., Dong Q., Lane C., Miyasato S., Sethuraman A., Schroeder M., Thanawala MK., Weng S., Dolinski K., Botstein D., Cherry JM.|Nucleic Acids Res.|2006
Saccharomyces genome database: underlying principles and organisation. |Dwight SS., Balakrishnan R., Christie KR., Costanzo MC., Dolinski K., Engel SR., Feierbach B., Fisk DG., Hirschman J., Hong EL., Issel-Tarver L., Nash RS., Sethuraman A., Starr B., Theesfeld CL., Andrada R., Binkley G., Dong Q., Lane C., Schroeder M., Weng S., Botstein D., Cherry JM.|Brief Bioinform.|2004
Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.|Christie KR., Weng S., Balakrishnan R., Costanzo MC., Dolinski K., Dwight SS., Engel SR., Feierbach B., Fisk DG., Hirschman JE., Hong EL., Issel-Tarver L., Nash R., Sethuraman A., Starr B., Theesfeld CL., Andrada R., Binkley G., Dong Q., Lane C., Schroeder M., Botstein D., Cherry JM.|Nucleic Acids Res.|2004
Edits to 'https://fairsharing.org/FAIRsharing.pzvw40' by 'The FAIRsharing Team' at 14:50, 12 Jan 2018 (approved):
'domains' has been modified:
Before:
Autonomously replicating sequence (ARS)||http://purl.obolibrary.org/obo/SO_0000436
Centromere||http://purl.obolibrary.org/obo/GO_0000775
Chromatin remodeling||http://purl.obolibrary.org/obo/GO_0006338
Chromosomal element nomenclature||
Citation||http://edamontology.org/data_0970
Epigenetics||http://edamontology.org/topic_3295
Free text||http://edamontology.org/data_3671
Gene Ontology (GO) enrichment|None|http://edamontology.org/data_3754
Gene array||http://purl.obolibrary.org/obo/SO_0005851
Gene expression data|x|http://edamontology.org/data_2603
Gene model annotation||http://purl.obolibrary.org/obo/FBcv_0003040
Gene name||http://edamontology.org/data_2299
Genetic strain||http://www.ebi.ac.uk/efo/EFO_0005135
Genome|property|http://purl.obolibrary.org/obo/SO_0001026
Image|None|http://edamontology.org/data_2968
Life Science|domain|http://www.fairsharing.org/ontology/SRAO_0000069
Literature annotations defined by experimental results||
Molecular interactions|pathways and networks||http://edamontology.org/topic_0602
Nucleotide||http://edamontology.org/format_1207
Orthologous|None|http://purl.obolibrary.org/obo/SO_0000858
Phenotype|information content entity|http://purl.obolibrary.org/obo/OGMS_0000023
Plasmid|None|http://purl.obolibrary.org/obo/OBI_0000430
Protein domain||http://edamontology.org/data_1468
Proteomics|property|http://edamontology.org/topic_0121
Pseudogene||http://purl.obolibrary.org/obo/SO_0000336
Reference genome||http://purl.obolibrary.org/obo/SO_0001505
Sequence feature||http://purl.obolibrary.org/obo/SO_0000110
Synthetic genetic array|None|
Systematic name||http://semanticscience.org/resource/CHEMINF_000106
Transcriptomics|property|http://edamontology.org/topic_3308
Transposable element||http://purl.obolibrary.org/obo/SO_0000101
After:
Autonomously replicating sequence (ARS)||http://purl.obolibrary.org/obo/SO_0000436
Centromere||http://purl.obolibrary.org/obo/GO_0000775
Chromatin remodeling||http://purl.obolibrary.org/obo/GO_0006338
Chromosomal element nomenclature||
Citation||http://edamontology.org/data_0970
Epigenetics||http://edamontology.org/topic_3295
Free text||http://edamontology.org/data_3671
Gene Ontology (GO) enrichment|None|http://edamontology.org/data_3754
Gene array||http://purl.obolibrary.org/obo/SO_0005851
Gene expression data|x|http://edamontology.org/data_2603
Gene model annotation||http://purl.obolibrary.org/obo/FBcv_0003040
Gene name||http://edamontology.org/data_2299
Genetic strain||http://www.ebi.ac.uk/efo/EFO_0005135
Genome|property|http://purl.obolibrary.org/obo/SO_0001026
Image|None|http://edamontology.org/data_2968
Life Science|domain|http://www.fairsharing.org/ontology/SRAO_0000069
Literature annotations defined by experimental results||
Nucleotide||http://edamontology.org/format_1207
Orthologous|None|http://purl.obolibrary.org/obo/SO_0000858
Phenotype|information content entity|http://purl.obolibrary.org/obo/OGMS_0000023
Plasmid|None|http://purl.obolibrary.org/obo/OBI_0000430
Protein domain||http://edamontology.org/data_1468
Proteomics|property|http://edamontology.org/topic_0121
Pseudogene||http://purl.obolibrary.org/obo/SO_0000336
Reference genome||http://purl.obolibrary.org/obo/SO_0001505
Sequence feature||http://purl.obolibrary.org/obo/SO_0000110
Synthetic genetic array|None|
Systematic name||http://semanticscience.org/resource/CHEMINF_000106
Transcriptomics|property|http://edamontology.org/topic_3308
Transposable element||http://purl.obolibrary.org/obo/SO_0000101
Molecular interaction|process|http://purl.obolibrary.org/obo/MI_0000
Added:
Molecular interaction|process|http://purl.obolibrary.org/obo/MI_0000
Removed:
Molecular interactions|pathways and networks||http://edamontology.org/topic_0602
Edits to 'https://fairsharing.org/FAIRsharing.pzvw40' by 'The FAIRsharing Team' at 22:01, 13 Sep 2016 (approved):
'contactName' has been modified:
Before:
After:
Helpdesk
Domain list has changed:
Previous values:
ARS elements||
Biochemical pathways||
Centromeres||
Chromatin modeling||
Chromosomal element nomenclature||
Chromosomal features including telomeres||
Free text description||
Gene Ontology annotation|x|
Gene expression|property|
Gene model||
Gene nomenclature||
Genetic and physical interactions (from BioGRID)||
Genetic strain||
Genome|property|http://purl.org/obo/owl/SO#SO_0001026
Histone modification||
Images|property|http://ontology.neuinfo.org/NIF/Backend/BIRNLex-OBI-proxy.owl#birnlex_11005
Literature annotations defined by experimental results||
Literature citation||
Nucleotide||
Orthology relationships||
Phenotype|information content entity|http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Investigation.owl#birnlex_2087
Plasmids||
Protein domains|x|
Proteomics|property|
Pseudogenes||
Reference genome sequence||
Synthetic genetic arrays||
Systematic gene product names||
Transcriptome|property|
Transposable element||
Yeast researchers||
New values:
ARS elements||
Biochemical pathways||
Centromeres||
Chromatin modeling||
Chromosomal element nomenclature||
Chromosomal features including telomeres||
Free text description||
Gene Ontology annotation|x|
Gene expression|property|
Gene model||
Gene nomenclature||
Genetic and physical interactions (from BioGRID)||
Genetic strain||
Genome|property|http://purl.org/obo/owl/SO#SO_0001026
Histone modification||
Images|property|http://ontology.neuinfo.org/NIF/Backend/BIRNLex-OBI-proxy.owl#birnlex_11005
Literature annotations defined by experimental results||
Literature citation||
Nucleotide||
Orthology relationships||
Phenotype|information content entity|http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Investigation.owl#birnlex_2087
Plasmids||
Protein domains|x|
Proteomics|property|
Pseudogenes||
Reference genome sequence||
Synthetic genetic arrays||
Systematic gene product names||
Transcriptome|property|
Transposable element||
Yeast researchers||
Life Science|domain|
Organisations have changed:
Previous values:
Department of Genetics|School of Medicine|Stanford University|Stanford|California|USA
National Human Genome Research Institute (NHGRI)|NIH
National Human Genome Research Institute (NHGRI)|US National Institutes of Health (NIH)|Bethesda|Maryland|USA
PHS HHS
SGD
New values:
Department of Genetics|School of Medicine|Stanford University|Stanford|California|USA
National Human Genome Research Institute (NHGRI)|NIH
US Department of Health and Human Services
Saccharomyces Genome Database
Grants have changed:
Previous values:
5U41HG001315-18
New values:
5U41HG001315-18
2U41HG002273-13
Added:
Removed: