standards > model/format > DOI:10.25504/FAIRsharing.qz0rvm


ready Variant Effect Predictor data format

Abbreviation: VEP


General Information
A text format devised by Ensembl for the eponymous Variant Effect Predictor tool.

Homepage http://www.ensembl.org/info/docs/tools/vep/vep_formats.html

Countries that developed this resource United Kingdom

Taxonomic range

Subjects 




How to cite this record FAIRsharing.org: VEP; Variant Effect Predictor data format; DOI: https://doi.org/10.25504/FAIRsharing.qz0rvm; Last edited: Jan. 8, 2019, 1:29 p.m.; Last accessed: Oct 21 2020 11:55 a.m.


Record updated: Nov. 24, 2016, 10:52 a.m. by The FAIRsharing Team.

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Support

General

Additional Information

TeSS training resources 

Ensembl variant effect predictor vep webinar



Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use





Publications

The Ensembl Variant Effect Predictor.

McLaren W,Gil L,Hunt SE,Riat HS,Ritchie GR,Thormann A,Flicek P,Cunningham F
Genome Biol 2016

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases (1)
Ensembl
Ensembl creates, integrates and distributes reference datasets and analysis tools that enable genomics. Ensembl is a genome browser that supports research in comparative genomics, evolution, sequence variation and transcriptional regulation. Ensembl annotate genes, computes multiple alignments, predicts regulatory function and collects disease data.

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

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Funds

Grant Number(s)

  • 200754 (European Commission FP7)

  • 222664 (European Commission FP7)

  • WT095908 (The Wellcome Trust, UK)

  • WT098051 (The Wellcome Trust, UK)