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InnateDB

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General Information

InnateDB has been developed to facilitate systems level investigations of the mammalian (human, mouse and bovine) innate immune response. Its goal is to provide a manually-curated knowledgebase of the genes, proteins, and particularly, the interactions and signaling responses involved in mammalian innate immunity. InnateDB incorporates information of the whole human, mouse and bovine interactomes by integrating interaction and pathway information from several of the major publicly available databases but aims to capture an improved coverage of the innate immunity interactome through manual curation.

Homepage http://www.innatedb.com/

Countries that developed this resource Australia , Canada , Republic of Ireland

Created in 2007

Taxonomic range

Knowledge Domains

Subjects

In the following recommendations:

How to cite this record FAIRsharing.org: InnateDB; InnateDB; DOI: https://doi.org/10.25504/FAIRsharing.rb2drw; Last edited: July 2, 2019, 12:07 p.m.; Last accessed: Aug 13 2020 3:58 p.m.

Record updated: July 2, 2019, 12:06 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.rb2drw' by 'The FAIRsharing Team' at 12:06, 02 Jul 2019 (approved):

	'organizations' has been modified:
		Before:
			Allergan|http://www.allergan.com/home|Funds
			Brinkman Laboratory, Simon Fraser University, Vancouver, BC, Canada|http://www.brinkman.mbb.sfu.ca|Maintains
			European Molecular Biology Laboratory, Australia|http://www.emblaustralia.org|Funds
		After:
			Allergan|http://www.allergan.com/home|Funds
			European Molecular Biology Laboratory, Australia|http://www.emblaustralia.org|Funds
			Brinkman Laboratory, Simon Fraser University, Vancouver, BC, Canada|http://www.brinkman.mbb.sfu.ca|Maintains
			Hancock Laboratory, University of British Columbia, Vancouver, Canada|http://cmdr.ubc.ca/bobh/|Maintains
			Lynn Group, EMBL Australia|https://www.emblaustralia.org/research-leadership/sa-node-lynn-group|Maintains
		Added:
			Hancock Laboratory, University of British Columbia, Vancouver, Canada|http://cmdr.ubc.ca/bobh/|Maintains
			Lynn Group, EMBL Australia|https://www.emblaustralia.org/research-leadership/sa-node-lynn-group|Maintains
		Removed:

	'miriam_id' has been modified:
		Before: None
		After:

Edits to 'https://fairsharing.org/FAIRsharing.rb2drw' by 'The FAIRsharing Team' at 10:19, 11 Oct 2016 (approved):

	'contactName' has been modified:
		Before:
			
		After:
			David Lynn
		Added:
		Removed:

In Collections

EMBL-ABR

International Molecular Exchange Consortium (IMEx)

Support

General

FAQ	http://www.innatedb.com/redirect.do?go=h ...
help	http://www.innatedb.com/redirect.do?go=h ...
online documentation	http://www.innatedb.com/doc/InnateDB_201 ...

Additional Information

Contact

David Lynn

Tools

analyze

http://www.innatedb.com/redirect.do?go=batchPw

Access / Retrieve Data

Conditions of Use

Applies to: General

Share alike

Data Curation

manual curation

https://wiki.cancerimagingarchive.net/x/ZwA2

Data Access

Download	http://www.innatedb.com/redirect.do?go=downloadCurated
browse	http://www.innatedb.com/browse.jsp
search	http://www.innatedb.com/redirect.do?go=searchMols
search	http://www.innatedb.com/redirect.do?go=searchIntxs
search	http://www.innatedb.com/redirect.do?go=searchPws
download	http://www.innatedb.com/redirect.do?go=downloadImported

Other Web Services

PSICQUIC web services

http://www.innatedb.com/accessViaWS.jsp

Publications

InnateDB: systems biology of innate immunity and beyond--recent updates and continuing curation.

Breuer K., Foroushani AK., Laird MR., Chen C., Sribnaia A., Lo R., Winsor GL., Hancock RE., Brinkman FS., Lynn DJ.,
Nucleic Acids Res. 2013

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Implementing Policies

Credit

Record Maintainer

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Funds

Allergan (Company)
European Molecular Biology Laboratory, Australia (Consortium)

Maintains

Brinkman Laboratory, Simon Fraser University, Vancouver, BC, Canada (University)
Hancock Laboratory, University of British Columbia, Vancouver, Canada (Lab)
Lynn Group, EMBL Australia (Lab)

InnateDB

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