standards > model/format > DOI:10.25504/FAIRsharing.rk682s


ready BioProject XML Schema


General Information
This is a XML Schema specification of BioProject data. A BioProject is a collection of biological data related to a single initiative, originating from a single organization or from a consortium. A BioProject record provides users a single place to find links to the diverse data types generated for that project.



How to cite this record FAIRsharing.org: BioProject XML Schema; BioProject XML Schema; DOI: https://doi.org/10.25504/FAIRsharing.rk682s; Last edited: March 15, 2018, 11:55 a.m.; Last accessed: Oct 19 2018 10:12 a.m.


Record added: June 25, 2015, 4 p.m.
Record updated: March 15, 2018, 10:19 a.m. by The FAIRsharing Team.

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Conditions of Use


Data Access




Publications

BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata.

Barrett T,Clark K,Gevorgyan R,Gorelenkov V,Gribov E,Karsch-Mizrachi I,Kimelman M,Pruitt KD,Resenchuk S,Tatusova T,Yaschenko E,Ostell J
Nucleic Acids Res 2011

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Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined


Implementing Databases (4)
BioSamples at the European Bioinformatics Institute
The BioSamples database aggregates sample information for reference samples (e.g. Coriell Cell lines) and samples for which data exist in one of the EBI's assay databases such as ArrayExpress, the European Nucleotide Archive or PRIDE. It provides links to assays an specific samples, and accepts direct submissions of sample information.

WormBase
WormBase is an international consortium of biologists and computer scientists dedicated to providing the research community with accurate, current, accessible information concerning the genetics, genomics and biology of C. elegans and related nematodes.

NCBI BioProject
A BioProject is a collection of biological data related to a single initiative, originating from a single organization or from a consortium. A BioProject record provides users a single place to find links to the diverse data types generated for that project. The BioProject database is a searchable collection of complete and incomplete (in-progress) large-scale sequencing, assembly, annotation, and mapping projects for cellular organisms.

NCBI BioSample
The BioSample database stores submitter-supplied descriptive information, or metadata, about the biological materials used in experimental assays, from which data stored in NCBI’s primary data archives are derived.

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This record is not implemented by any policy.


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