standards > terminology artifact > DOI:10.25504/FAIRsharing.ry1ezg
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ready Lentil Ontology

Abbreviation: CO_339


General Information
The Lentil Ontology is part of the Crop Ontology (CO) project. The Crop Ontology has been created to compile validated concepts along with their inter-relationships on anatomy, structure and phenotype of Crops, on trait measurement and methods as well as on Germplasm with the multi-crop passport terms. The concepts of the CO are being used to curate agronomic databases and describe the data. The use of ontology terms to describe agronomic phenotypes and the accurate mapping of these descriptions into databases is important in comparative phenotypic and genotypic studies across species and gene-discovery experiments as it provides harmonized description of the data and therefore facilitates the retrieval of information.

Homepage http://www.cropontology.org/ontology/CO_339

Countries that developed this resource Worldwide

Created in 2015

Taxonomic range

Knowledge Domains 




How to cite this record FAIRsharing.org: CO_339; Lentil Ontology; DOI: https://doi.org/10.25504/FAIRsharing.ry1ezg; Last edited: March 12, 2020, 4:27 p.m.; Last accessed: May 30 2020 6:25 a.m.


Record added: Jan. 18, 2018, 3:41 p.m.
Record updated: March 11, 2020, 8:50 a.m. by The FAIRsharing Team.

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Support

General

support email Shiv Kumar Agrawal
support email Crop Ontology Helpdesk
forum Crop Ontology Forum
help Video Tutorials

Additional Information

Contact Karthika Rajendran

Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Release

Browse http://agroportal.lirmm.fr/ontologies/CO_339

Data Curation

Annotation tool http://www.cropontology.org/annotation-tool
Add new terms http://www.cropontology.org/add-ontology

Data Access

Download OBO Format http://www.cropontology.org/obo/CO_339
Download RDF http://www.cropontology.org/ontology/CO_339/Lentil/nt
AgroPortal: Browse / Download http://agroportal.lirmm.fr/ontologies/CO_339

REST Web Services

Crop Ontology API http://www.cropontology.org/api


Publications

No publications available



Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Implementing Databases (2)
Planteome
A resource providing data on bioentities and their associated ontology terms for Plant Biology. The database provides access to ontology-based annotations of genes, phenotypes and germplasms from about 90 plant species. A number of internal and external ontologies are used to annotate the biological data available from this resource.
AgroPortal
The AgroPortal project reuses the biomedical domain’s semantic tools and insights to serve agronomy, but also food, plant, agriculture and biodiversity sciences. We offer a portal that features ontology hosting, search, versioning, visualization, comment, and recommendation; enables semantic annotation; stores and exploits ontology alignments; and enables interoperation with the semantic web. The AgroPortal specifically satisfies requirements of the agronomy community in terms of ontology formats (e.g., SKOS vocabularies and trait dictionaries) and supported features (offering detailed metadata and advanced annotation capabilities). The AgroPortal content is automatically retrieved by FAIRsharing.org (https://fairsharing.org/) and the Agrisemantics Map of Data Standards (http://vest.agrisemantics.org/).

Implementing Policies

This record is not implemented by any policy.


Credit

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