standards > model/format > DOI:10.25504/FAIRsharing.rz77m6


ready Transition Markup Language

Abbreviation: HUPO-PSI TraML


General Information
The HUPO PSI Mass Spectrometry Standards Working Group (MSS WG) has developed a specification for a standardized format for the exchange and transmission of transition lists for selected reaction monitoring (SRM) experiments. This specification has now completed rigorous review with the PSI document process and is complete



How to cite this record FAIRsharing.org: HUPO-PSI TraML; Transition Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.rz77m6; Last edited: March 15, 2018, 11:55 a.m.; Last accessed: Oct 20 2018 1:26 p.m.


This record is maintained by HUPO PSI  (HUPOPSI)

Record updated: March 15, 2018, 11:03 a.m. by The FAIRsharing Team.

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Publications

TraML--a standard format for exchange of selected reaction monitoring transition lists.

Deutsch EW,Chambers M,Neumann S,Levander F,Binz PA,Shofstahl J,Campbell DS,Mendoza L,Ovelleiro D,Helsens K,Martens L,Aebersold R,Moritz RL,Brusniak MY
Mol Cell Proteomics 2011

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Implementing Databases (1)
PRoteomics IDEntifications database
The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence.

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This record is not implemented by any policy.


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Grant Number(s)

  • FP7 'ProteomeXchange' 260558 (European Commission)

  • GM087221 (US National Institute of General Medical Sciences, (NIGMS))

  • HG005805 (National Human Genome Research Institute)

  • N01- HV -28179 (National Heart Lung and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA)