standards > model/format > DOI:10.25504/FAIRsharing.rz77m6

ready Transition Markup Language

Abbreviation: HUPO-PSI TraML

General Information
The HUPO PSI Mass Spectrometry Standards Working Group (MSS WG) has developed a specification for a standardized format for the exchange and transmission of transition lists for selected reaction monitoring (SRM) experiments. This specification has now completed rigorous review with the PSI document process and is complete


Countries that developed this resource Belgium , Germany , Switzerland , United Kingdom , United States

Created in 2010

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How to cite this record HUPO-PSI TraML; Transition Markup Language; DOI:; Last edited: Jan. 8, 2019, 1:34 p.m.; Last accessed: Oct 28 2020 8:21 a.m.

This record is maintained by HUPO PSI  (HUPOPSI)

Record updated: March 15, 2018, 11:03 a.m. by The FAIRsharing Team.

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TraML--a standard format for exchange of selected reaction monitoring transition lists.

Deutsch EW,Chambers M,Neumann S,Levander F,Binz PA,Shofstahl J,Campbell DS,Mendoza L,Ovelleiro D,Helsens K,Martens L,Aebersold R,Moritz RL,Brusniak MY
Mol Cell Proteomics 2011

View Paper (PubMed) View Publication

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Related Databases (1)
PRoteomics IDEntifications database
The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence.

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Grant Number(s)

  • FP7 'ProteomeXchange' 260558 (European Commission)

  • GM087221 (National Institute of General Medical Sciences (NIGMS), Bethesda, MD, USA)

  • HG005805 (National Human Genome Research Institute (NHGRI), Bethesda, MD, USA)

  • N01- HV -28179 (National Heart, Lung and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA)