UniProt Knowledgebase
Abbreviation:UniProtKB
Homepage http://www.uniprot.org/uniprot/
Countries that developed this resource Switzerland , United Kingdom , United States
Created in 2002
Taxonomic range
Knowledge Domains
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User-defined Tags
In the following recommendations:
How to cite this record FAIRsharing.org: UniProtKB; UniProt Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.s1ne3g; Last edited: March 19, 2021, 11:50 a.m.; Last accessed: Apr 17 2021 4:34 p.m.
Publication for citation UniProt: the universal protein knowledgebase. https://academic.oup.com/nar/article/45/D1/D158/2605721; Nucleic Acids Res ; 2016; 10.1093/nar/gkw1099;
Record updated: March 19, 2021, 11:49 a.m. by The FAIRsharing Team.
| FAQ | http://www.uniprot.org/help/ |
| contact form | Contact |
| help | https://www.uniprot.org/help/uniprotkb |
| training | Youtube channel |
| @uniprot |
Additional Information
| Contact | General contact |
TeSS training resources
| SPARQL Endpoint | https://sparql.uniprot.org |
Conditions of Use
Applies to: Data useData Curation
| Biocuration | http://www.uniprot.org/help/biocuration |
Data Access
| Download | http://www.uniprot.org/downloads |
| Browse | https://www.uniprot.org/uniprot/ |
| Text search | https://www.uniprot.org/uniprot/ |
| BLAST | http://www.uniprot.org/blast/ |
REST Web Services
| REST API | https://www.uniprot.org/help/api |
Other Web Services
| Java remote API | https://www.ebi.ac.uk/uniprot/japi/index.html |
| SPARQL | https://sparql.uniprot.org/sparql |
UniProt: a hub for protein information
The UniProt Consortium
Nucleic Acids Res. 2015
UniProt: the universal protein knowledgebase.
https://academic.oup.com/nar/article/45/D1/D158/2605721
Nucleic Acids Res 2016
UniProt: a worldwide hub of protein knowledge.
https://academic.oup.com/nar/article/47/D1/D506/5160987
Nucleic Acids Res 2018
UniProt: the universal protein knowledgebase.
UniProt Consortium T
Nucleic Acids Res 2018
UniProt: the universal protein knowledgebase.
The UniProt Consortium
Nucleic Acids Res 2016
UniProt Tools.
Pundir S,Martin MJ,O'Donovan C
Curr Protoc Bioinformatics 2016
Activities at the Universal Protein Resource (UniProt).
The UniProt Consortium
Nucleic Acids Res 2013
Update on activities at the Universal Protein Resource (UniProt) in 2013.
UniProt Consortium
Nucleic Acids Res 2012
The UniProt-GO Annotation database in 2011.
UniProt Consortium
Nucleic Acids Res 2011
UniProt Knowledgebase: a hub of integrated protein data.
Magrane M
Database (Oxford) 2011
The Universal Protein Resource (UniProt) in 2010.
UniProt Consortium
Nucleic Acids Res 2009
The Universal Protein Resource (UniProt) 2009.
UniProt Consortium
Nucleic Acids Res 2008
The universal protein resource (UniProt).
UniProt Consortium
Nucleic Acids Res 2007
UniProtKB/Swiss-Prot.
Boutet E,Lieberherr D,Tognolli M,Schneider M,Bairoch A
Methods Mol Biol 2008
The Universal Protein Resource (UniProt): an expanding universe of protein information.
Wu CH,Apweiler R,Bairoch A,Natale DA,Barker WC,Boeckmann B,Ferro S,Gasteiger E,Huang H,Lopez R,Magrane M,Martin MJ,Mazumder R,O'Donovan C,Redaschi N,Suzek B
Nucleic Acids Res 2005
The Universal Protein Resource (UniProt).
Bairoch A,Apweiler R,Wu CH,Barker WC,Boeckmann B,Ferro S,Gasteiger E,Huang H,Lopez R,Magrane M,Martin MJ,Natale DA,O'Donovan C,Redaschi N,Yeh LS
Nucleic Acids Res 2004
UniProt archive.
Leinonen R,Diez FG,Binns D,Fleischmann W,Lopez R,Apweiler R
Bioinformatics 2004
The SWISS-PROT protein sequence database: its relevance to human molecular medical research.
Bairoch A,Apweiler R
J Mol Med (Berl) 1997
Reporting Guidelines
No guidelines defined
Terminology Artifacts
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
- Dragon Antimicrobial Peptide Database
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- PRofils pour l'Identification Automatique du Metabolisme
- The Vertebrate Genome Annotation Database
- PROSITE
- UniPathway
- PRINTS
- Antimicrobial Peptide Database
- European Variation Archive
- FlyMine
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- Immunology Database and Analysis Portal
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- Host Pathogen Interaction Database
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- Wikidata
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- Proteome-pI : proteome isoelectric point database
- Target Central Resource Database
- Open Targets
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- Enzyme Portal
- Orthologous MAtrix
- ViralZone
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- Mutual Folding Induced by Binding Database
- Target Pathogen
- Disordered Binding Sites Database
- ChannelsDB
- Mechanism and Catalytic Site Atlas
- Small angle scattering biological data bank
- Vertebrate Secretome Database
- HypoxiaDB
- Genome3D
- InParanoid
- MitoProteome
- Ashbya Genome Database
- PDZscape
- database of Disease-Gene Associations with annotated Relationships
- PROtein-protein compleX MutAtion ThErmodynamics Database
- Complex Portal
- HymenopteraMine
- RatMine
- WormMine
- HumanMine
- MedicMine
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- An INtegrated Data warehouse of mIcrobial GenOmes
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- Protein Data Bank in Europe - Knowledge Base
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- Chlamydiae Database
- Agronomic Linked Data
- TISSUES
- GlyGen: Computational and Informatics Resources for Glycoscience
- eLibrary of Microbial Systematics and Genomics
- Information Commons for Rice
- iDog
- PathosSystems Resource Integration Center Repository
- ADPriboDB
- MycoCosm
- Integrated Interactions Database
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Record Maintainer
This record is maintained by uniprot
Funds
European Molecular Biology Laboratory (EMBL), Heidelberg, Germany (Research institute)
British Heart Foundation (Charitable foundation)
Swiss Federal Government (SERI) (Government body)
National Science Foundation (NSF), USA (Government body)
National Institutes of Health (NIH), Bethesda, MD, USA (Government body)
Maintains
UniProt Consortium (Consortium)
Grant Number(s)
DBI-1062520 (National Science Foundation (NSF), USA)
G-1307 (Parkinson's Disease UK (PDUK))
G08LM010720 (National Institutes of Health (NIH), Bethesda, MD, USA)
P20GM103446 (National Institutes of Health (NIH), Bethesda, MD, USA)
R01GM080646 (National Institutes of Health (NIH), Bethesda, MD, USA)
RG/13/5/30112 (British Heart Foundation)
U41HG007822 (National Institutes of Health (NIH), Bethesda, MD, USA)
U41HG02273 (National Institutes of Health (NIH), Bethesda, MD, USA)
