databases > DOI:10.25504/FAIRsharing.tby3x7
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ready Arabidopsis Thaliana Trans-factor and cis-Element prediction Database

Abbreviation:ATTED-II

General Information
ATTED-II is a coexpression database for plant species with parallel views of multiple coexpression data sets and network analysis tools. The user can find functional gene relationships and design experiments to identify gene functions by reverse genetics and general molecular biology techniques.




How to cite this record FAIRsharing.org: ATTED-II; Arabidopsis Thaliana Trans-factor and cis-Element prediction Database; DOI: https://doi.org/10.25504/FAIRsharing.tby3x7; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Sep 25 2021 12:52 p.m.


Record updated: April 16, 2021, 10:51 a.m. by The FAIRsharing Team.

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Applies to: General

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Publications

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis.

Obayashi T., Kinoshita K., Nakai K., Shibaoka M., Hayashi S., Saeki M., Shibata D., Saito K., Ohta H.,
Nucleic Acids Res. 2007

View Paper (PubMed)

ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression.

Aoki Y,Okamura Y,Tadaka S,Kinoshita K,Obayashi T
Plant Cell Physiol 2015

View Paper (PubMed) View Publication

ATTED-II in 2014: evaluation of gene coexpression in agriculturally important plants.

Obayashi T,Okamura Y,Ito S,Tadaka S,Aoki Y,Shirota M,Kinoshita K
Plant Cell Physiol 2013

View Paper (PubMed) View Publication

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Grant Number(s)

  • 11102558 (Japan Science and Technology Agency (JST), Tokyo, Japan)

  • 24114005 (Japan Society for the Promotion of Science, Tokyo, Japan)