Edits to 'https://fairsharing.org/FAIRsharing.tpqndj' by 'The FAIRsharing Team' at 13:34, 11 Mar 2021 (approved):
'licences' has been modified:
Before:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
After:
Creative Commons Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)|https://creativecommons.org/licenses/by-sa/4.0/|Data
Added:
Creative Commons Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)|https://creativecommons.org/licenses/by-sa/4.0/|Data
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Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
'standardsImplemented' has been modified:
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Protein Data Bank Format
Digital Object Identifier
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Protein Data Bank Format
Digital Object Identifier
Bioschemas
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Bioschemas
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Edits to 'https://fairsharing.org/FAIRsharing.tpqndj' by 'The FAIRsharing Team' at 11:59, 22 Jun 2020 (approved):
'related_databases' has been modified:
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Protein Model Database
Molecular Modeling Database (MMDB)
SWISS-MODEL Repository of 3D protein structure models
ModBase database of comparative protein structure models
After:
Molecular Modeling Database (MMDB)
SWISS-MODEL Repository of 3D protein structure models
ModBase database of comparative protein structure models
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Removed:
Protein Model Database
Edits to 'https://fairsharing.org/FAIRsharing.tpqndj' by 'The FAIRsharing Team' at 11:56, 22 Jun 2020 (approved):
'description' has been modified:
Before: The Model Archive provides a stable archive for computational macro-molecular models published in the scientific literature. The model archive provides a unique stable accession code (DOI) for each deposited model, which can be directly referenced in the corresponding manuscripts. Model Archive is part of the Protein Model Portal (http://www.proteinmodelportal.org).
After: The Model Archive provides a stable archive for computational macro-molecular models published in the scientific literature. The model archive provides a unique stable accession code (DOI) for each deposited model, which can be directly referenced in the corresponding manuscripts.
Edits to 'https://fairsharing.org/FAIRsharing.tpqndj' by 'The FAIRsharing Team' at 11:56, 22 Jun 2020 (approved):
'organizations' has been modified:
Before:
Biozentrum, University of Basel, Basel, Switzerland|http://www.biozentrum.unibas.ch/research/groups-platforms/overview/unit/schwede/|Maintains
Swiss Institute of Bioinformatics (SIB)|http://www.sib.swiss/|Maintains
National Institutes of Health (NIH), Bethesda, MD, USA|https://www.nih.gov/|Funds
After:
National Institutes of Health (NIH), Bethesda, MD, USA|https://www.nih.gov/|Funds
Biozentrum, University of Basel, Basel, Switzerland|http://www.biozentrum.unibas.ch/research/groups-platforms/overview/unit/schwede/|Maintains
Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains,Funds
Added:
Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains,Funds
Removed:
Swiss Institute of Bioinformatics (SIB)|http://www.sib.swiss/|Maintains
'standardsImplemented' has been modified:
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Protein Data Bank Format
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Protein Data Bank Format
Digital Object Identifier
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Digital Object Identifier
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'supportLinks' has been modified:
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After:
email|help-modelarchive@unibas.ch
help|https://www.modelarchive.org/help
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email|help-modelarchive@unibas.ch
help|https://www.modelarchive.org/help
Removed:
'name' has been modified:
Before: Model Archive - theoretical models of macromolecular structures
After: Model Archive
'tools' has been modified:
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Structural Biology Knowledgebase||http://sbkb.org/
Protein Model Portal||http://www.proteinmodelportal.org/
After:
Added:
Removed:
Structural Biology Knowledgebase||http://sbkb.org/
Protein Model Portal||http://www.proteinmodelportal.org/
'onto_disciplines' has been modified:
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Life Science
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Structural Biology
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Structural Biology
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Life Science
'onto_domains' has been modified:
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Mathematical model
Prediction and recognition
Protein structure
modeling and simulation objective
protein
structure
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Mathematical model
Prediction and recognition
Protein structure
Structure
modeling and simulation objective
protein
structure
Added:
Structure
Removed:
'dataProcesses' has been modified:
Before:
Model Deposition, data curation, http://www.modelarchive.org/project/step1
web interface, data access, http://www.modelarchive.org/
After:
Model Deposition, data curation, https://www.modelarchive.org/projects/new/basic
Search, data access, https://www.modelarchive.org/
Added:
Model Deposition, data curation, https://www.modelarchive.org/projects/new/basic
Search, data access, https://www.modelarchive.org/
Removed:
Model Deposition, data curation, http://www.modelarchive.org/project/step1
web interface, data access, http://www.modelarchive.org/
'miriam_id' has been modified:
Before: None
After:
'publications' has been modified:
Before:
Outcome of a workshop on applications of protein models in biomedical research.|Schwede T,Sali A,Honig B,Levitt M,Berman HM,Jones D,Brenner SE,Burley SK,Das R,Dokholyan NV,Dunbrack RL Jr,Fidelis K,Fiser A,Godzik A,Huang YJ,Humblet C,Jacobson MP,Joachimiak A,Krystek SR Jr,Kortemme T,Kryshtafovych A,Montelione GT,Moult J,Murray D,Sanchez R,Sosnick TR,Standley DM,Stouch T,Vajda S,Vasquez M,Westbrook JD,Wilson IA|Structure|2009
The Protein Model Portal--a comprehensive resource for protein structure and model information.|Haas J,Roth S,Arnold K,Kiefer F,Schmidt T,Bordoli L,Schwede T|Database (Oxford)|2013
After:
The Protein Model Portal--a comprehensive resource for protein structure and model information.|Haas J,Roth S,Arnold K,Kiefer F,Schmidt T,Bordoli L,Schwede T|Database (Oxford)|2013
Outcome of a workshop on applications of protein models in biomedical research.|Schwede T,Sali A,Honig B,Levitt M,Berman HM et al.|Structure|2009
Added:
Outcome of a workshop on applications of protein models in biomedical research.|Schwede T,Sali A,Honig B,Levitt M,Berman HM et al.|Structure|2009
Removed:
Outcome of a workshop on applications of protein models in biomedical research.|Schwede T,Sali A,Honig B,Levitt M,Berman HM,Jones D,Brenner SE,Burley SK,Das R,Dokholyan NV,Dunbrack RL Jr,Fidelis K,Fiser A,Godzik A,Huang YJ,Humblet C,Jacobson MP,Joachimiak A,Krystek SR Jr,Kortemme T,Kryshtafovych A,Montelione GT,Moult J,Murray D,Sanchez R,Sosnick TR,Standley DM,Stouch T,Vajda S,Vasquez M,Westbrook JD,Wilson IA|Structure|2009
'homepage' has been modified:
Before: http://www.modelarchive.org/
After: https://www.modelarchive.org/
Edits to 'https://fairsharing.org/FAIRsharing.tpqndj' by 'The FAIRsharing Team' at 11:28, 30 Aug 2016 (approved):
'description' has been modified:
Before: The Model Archive provides a stable archive for computational macro-molecular models published in the scientific literature. Besides the actual model coordinates, archived models should include sufficient details about assumptions, parameters and constraints applied in the simulation to allow the user of a model to assess and if necessary reproduce the simulation. Since 2006, only structures that have been determined experimentally are allowed to be deposited in the PDB, and theoretical models of macromolecular structures are no longer part of the PDB archive. The Model Archive is being developed following a community recommendation during a workshop on applications of protein models in biomedical research as part of Protein Model Portal.
After: The Model Archive provides a stable archive for computational macro-molecular models published in the scientific literature. The model archive provides a unique stable accession code (DOI) for each deposited model, which can be directly referenced in the corresponding manuscripts. Model Archive is part of the Protein Model Portal (http://www.proteinmodelportal.org). Domain list has changed: Previous values: 3D structural data including 3D coordinates|| Computational model|property|http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Investigation.owl#birnlex_2300 Computational predictions|| Protein|material|http://purl.org/obo/owl/GO#GO_0003675 Protein 3D structure|| Simulation|property| Structural model|| Structure data|information content entity|http://purl.org/obo/owl/PATO#PATO_0000141 New values: 3D structural data including 3D coordinates|| Computational model|property|http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Investigation.owl#birnlex_2300 Computational predictions|| Protein|material|http://purl.org/obo/owl/GO#GO_0003675 Protein 3D structure|| Simulation|property| Structural model|| Structure data|information content entity|http://purl.org/obo/owl/PATO#PATO_0000141 Life Science|domain| Publication List has changed: Previous values: New values: Outcome of a workshop on applications of protein models in biomedical research. The Protein Model Portal--a comprehensive resource for protein structure and model information. Organisations have changed: Previous values: US National Institutes of Health (NIH) New values: US National Institutes of Health (NIH) SIB|Swiss Institute of Bioinformatics Biozentrum|University of Basel
Model Archive
