standards > reporting guideline > DOI:10.25504/FAIRsharing.va1hck


ready Minimum Information about a (Meta)Genome Sequence

Abbreviation: MIxS - MIGS/MIMS


General Information
MIGS/MIMS (Minimum Information About a (Meta)Genome Sequence) outlines a conceptual structure for extending the core information that has been traditionally captured by the INSDC (DDBJ/EMBL/Genbank) to describe genomic and metagenomic sequences. The MIMS extension describes key aspects of environmental context.

Homepage http://wiki.gensc.org/index.php?title=MIGS/MIMS

Countries that developed this resource United Kingdom

Created in 2007




How to cite this record FAIRsharing.org: MIxS - MIGS/MIMS; Minimum Information about a (Meta)Genome Sequence; DOI: https://doi.org/10.25504/FAIRsharing.va1hck; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: Sep 15 2019 9:44 p.m.


This record is maintained by Genomic Standards Consortium  (pyilmaz)

Record updated: Oct. 17, 2016, 10:19 a.m. by The FAIRsharing Team.

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Minimum Information for Biological and Biomedical Investigations
Genomic Standards Consortium



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The minimum information about a genome sequence (MIGS) specification.

Field D,Garrity G,Gray T,Morrison N,Selengut J,Sterk P,Tatusova T,Thomson N,Allen MJ,Angiuoli SV,Ashburner M,Axelrod N,Baldauf S,Ballard S,Boore J,Cochrane G,Cole J,Dawyndt P,De Vos P,DePamphilis C,Edwards R,Faruque N,Feldman R,Gilbert J,Gilna P,Glockner FO,Goldstein P,Guralnick R,Haft D,Hancock D,Hermjakob H,Hertz-Fowler C,Hugenholtz P,Joint I,Kagan L,Kane M,Kennedy J,Kowalchuk G,Kottmann R,Kolker E,Kravitz S,Kyrpides N,Leebens-Mack J,Lewis SE,Li K,Lister AL,Lord P,Maltsev N,Markowitz V,Martiny J,Methe B,Mizrachi I,Moxon R,Nelson K,Parkhill J,Proctor L,White O,Sansone SA,Spiers A,Stevens R,Swift P,Taylor C,Tateno Y,Tett A,Turner S,Ussery D,Vaughan B,Ward N,Whetzel T,San Gil I,Wilson G,Wipat A
Nat Biotechnol 2008

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Implementing Databases (3)
BacMap
BacMap is a picture atlas of annotated bacterial genomes. It is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes.
MGnify
EBI Metagenomics has changed its name to MGnify to reflect a change in scope. This is a free-to-use resource aiming at supporting all metagenomics researchers. The service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. You can freely browse all the public data in the repository.
MAR databases
The MAR databases is a collection of manually curated marine microbial contextual and sequence databases.

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This record is not implemented by any policy.