Minimum Information about a (Meta)Genome Sequence
Abbreviation: MIxS - MIGS/MIMS
Homepage http://wiki.gensc.org/index.php?title=MIGS/MIMS
Countries that developed this resource United Kingdom
Created in 2007
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: MIxS - MIGS/MIMS; Minimum Information about a (Meta)Genome Sequence; DOI: https://doi.org/10.25504/FAIRsharing.va1hck; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: Aug 04 2020 4:09 a.m.
Record updated: Oct. 17, 2016, 10:19 a.m. by The FAIRsharing Team.
| online documentation | http://gensc.org/migsmims/migsmims-minim ... |
| online documentation | http://mibbi.sourceforge.net/projects/MI ... |
| online documentation | http://gensc.sourceforge.net/docs/migsmi ... |
| online documentation | http://wiki.gensc.org/images/4/45/MIGS_M ... |
Additional Information
| Contact | Pelin Yilmaz ORCID |
No XSD schemas defined
Conditions of Use
The minimum information about a genome sequence (MIGS) specification.
Field D,Garrity G,Gray T,Morrison N,Selengut J,Sterk P,Tatusova T,Thomson N,Allen MJ,Angiuoli SV,Ashburner M,Axelrod N,Baldauf S,Ballard S,Boore J,Cochrane G,Cole J,Dawyndt P,De Vos P,DePamphilis C,Edwards R,Faruque N,Feldman R,Gilbert J,Gilna P,Glockner FO,Goldstein P,Guralnick R,Haft D,Hancock D,Hermjakob H,Hertz-Fowler C,Hugenholtz P,Joint I,Kagan L,Kane M,Kennedy J,Kowalchuk G,Kottmann R,Kolker E,Kravitz S,Kyrpides N,Leebens-Mack J,Lewis SE,Li K,Lister AL,Lord P,Maltsev N,Markowitz V,Martiny J,Methe B,Mizrachi I,Moxon R,Nelson K,Parkhill J,Proctor L,White O,Sansone SA,Spiers A,Stevens R,Swift P,Taylor C,Tateno Y,Tett A,Turner S,Ussery D,Vaughan B,Ward N,Whetzel T,San Gil I,Wilson G,Wipat A
Nat Biotechnol 2008
Reporting Guidelines
Terminology Artifacts
No semantic standards defined
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
BacMap is a picture atlas of annotated bacterial genomes. It is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes.
MGnify
EBI Metagenomics has changed its name to MGnify to reflect a change in scope. This is a free-to-use resource aiming at supporting all metagenomics researchers. The service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. You can freely browse all the public data in the repository.
MAR databases
The MAR databases is a collection of manually curated marine microbial contextual and sequence databases, based at the Marine Metagenomics Portal. This was developed as a part of the ELIXIR EXCELERATE project in 2017 and is maintained by The Center for Bioinformatics (SfB) at the UiT The Arctic University of Norway. SfB is hosting the UiT node of ELIXIR Norway. The MarRef, MarDb, MarFun and MarCat contextual databases are built by compiling data from a number of public available sequence, taxonomy and literature databases in a semi-automatic fashion.
This record is not implemented by any policy.
Record Maintainer
This record is maintained by Genomic Standards Consortium (pyilmaz)
Funds
Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)
United States Department of Energy, Office of Science, USA (Government body)
Gordon and Betty Moore Foundation (Government body)
National Science Foundation (NSF), USA (Government body)
Natural Environment Research Council (NERC), UK (Government body)
Maintains
Genomic Standards Consortium (Consortium)
