standards > terminology artifact > DOI:10.25504/FAIRsharing.vbejb6
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ready Genomic Feature and Variation Ontology

Abbreviation: GFVO


General Information
The Genomic Feature and Variation Ontology (GFVO) is modeled to represent genomic data using the Resource Description Format (RDF) or Linked Data using JSON (JSON-LD). The GFVO specifically addresses genomic data as it is regularly shared using the GFF3 (incl. FASTA), GTF, GVF and VCF file formats. GFVO simplifies data integration and enables linking of genomic annotations across datasets through common semantics of genomic types and relations. NOTE: GFVO in BioPortal is a simplified version without ontology imports and having class/property equivalences removed.

Homepage https://github.com/BioInterchange/Ontologies

Countries that developed this resource Norway , Saudi Arabia , United States

Created in 2015

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How to cite this record FAIRsharing.org: GFVO; Genomic Feature and Variation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.vbejb6; Last edited: Feb. 4, 2020, 10:15 a.m.; Last accessed: Aug 14 2020 12:03 a.m.

Publication for citation  GFVO: the Genomic Feature and Variation Ontology. Baran J,Durgahee BS,Eilbeck K,Antezana E,Hoehndorf R,Dumontier M; PeerJ ; 2015; 10.7717/peerj.933;


Record added: Oct. 24, 2017, 9:41 a.m.
Record updated: Feb. 4, 2020, 10:14 a.m. by The FAIRsharing Team.

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GFVO: the Genomic Feature and Variation Ontology.

Baran J,Durgahee BS,Eilbeck K,Antezana E,Hoehndorf R,Dumontier M
PeerJ 2015

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Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.


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