databases > DOI:10.25504/FAIRsharing.x7pwnw
Update in progress: note to all users. FAIRsharing is always available for you to search and discover databases, standards and data policies. However, for producers of these resources who maintain or wish to add new records, please note that editing is disabled until September while we migrate our data to our new, improved system. Read our blog post or get in touch with us for more details.

ready short Open Reading Frame database

Abbreviation:sorfs.org

General Information
sORFs.org is a database for sORFs identified using ribosome profiling. Starting from ribosome profiling, sORFs.org identifies sORFs, incorporates state-of-the-art tools and metrics and stores results in a public database. Two query interfaces are provided, a default one enabling quick lookup of sORFs and a BioMart interface providing advanced query and export possibilities. At present, sORFs.org harbors 263 354 sORFs that demonstrate ribosome occupancy, originating from three different cell lines: HCT116 (human), E14_mESC (mouse) and S2 (fruit fly).

Homepage http://www.sorfs.org

Countries that developed this resource Belgium

Created in 2015

Knowledge Domains 

Subjects 





How to cite this record FAIRsharing.org: sorfs.org; short Open Reading Frame database; DOI: https://doi.org/10.25504/FAIRsharing.x7pwnw; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jul 30 2021 6:16 p.m.


This record is maintained by volexiou

Record added: Nov. 3, 2015, 9:44 a.m.
Record updated: Jan. 6, 2017, 2:59 p.m. by The FAIRsharing Team.

Show edit history


In Collections

Support

General

Additional Information


Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Curation

Data Access




Publications

sORFs.org: a repository of small ORFs identified by ribosome profiling.

Olexiouk V,Crappe J,Verbruggen S,Verhegen K,Martens L,Menschaert G
Nucleic Acids Res 2015

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Funds

Maintains

Grant Number(s)

  • 12A7813N (Fonds Wetenschappelijk Onderzoek, Belgium)

  • G0D3114N (Fonds Wetenschappelijk Onderzoek, Belgium)