databases > DOI:10.25504/FAIRsharing.x989d5

ready Database of Orthologous Groups

Abbreviation:OrthoDB

General Information
OrthoDB presents a catalog of eukaryotic orthologous protein-coding genes. Orthology refers to the last common ancestor of the species under consideration, and thus OrthoDB explicitly delineates orthologs at each radiation along the species phylogeny.

Homepage http://www.orthodb.org/v9/

Developed in Switzerland

Created in 2010





How to cite this record FAIRsharing.org: OrthoDB; Database of Orthologous Groups; DOI: https://doi.org/10.25504/FAIRsharing.x989d5; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 24 2019 6:05 a.m.


Record updated: Dec. 12, 2016, 5:32 a.m. by The FAIRsharing Team.

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In Collections
ELIXIR Core Data and Data Deposition Resources

Support

General

support email support@orthodb.org
help http://www.orthodb.org/v9/?page=help
Mailing List None

Additional Information

Contact Evgenia V. Kriventseva
Identifiers.org MIR:00000221

Tools
OrthoDB Software http://www.orthodb.org/v9/?page=software v2.3.1

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access

search http://www.orthodb.org/v9/
download http://www.orthodb.org/v9/?page=filelist

Other Web Services

OrthoDB API http://www.orthodb.org/v9/?page=api


Publications

OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011.

Waterhouse RM., Zdobnov EM., Tegenfeldt F., Li J., Kriventseva EV.,
Nucleic Acids Res. 2011

View Paper (PubMed) View Publication

OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software.

Kriventseva EV,Tegenfeldt F,Petty TJ,Waterhouse RM,Simao FA,Pozdnyakov IA,Ioannidis P,Zdobnov EM
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

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Grant Number(s)

  • 31003A-125350 (Swiss National Sciences Foundation (SNCF))

  • 31003A_143936 (Swiss National Sciences Foundation (SNCF))

  • PDFMP3_137064 (Swiss National Sciences Foundation (SNCF))