databases > DOI:10.25504/FAIRsharing.x989d5

ready Database of Orthologous Groups

Abbreviation:OrthoDB

General Information
OrthoDB presents a catalog of eukaryotic orthologous protein-coding genes. Orthology refers to the last common ancestor of the species under consideration, and thus OrthoDB explicitly delineates orthologs at each radiation along the species phylogeny.

Homepage http://www.orthodb.org/v9/

Developed in Switzerland

Created in 2010





How to cite this record FAIRsharing.org: OrthoDB; Database of Orthologous Groups; DOI: https://doi.org/10.25504/FAIRsharing.x989d5; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Mar 27 2019 2:09 a.m.


Record updated: Dec. 12, 2016, 5:32 a.m. by The FAIRsharing Team.

Show edit history


Support

General

support email support@orthodb.org
help http://www.orthodb.org/v9/?page=help
Mailing List None

Additional Information

Contact Evgenia V. Kriventseva
Identifiers.org MIR:00000221

Tools
OrthoDB Software http://www.orthodb.org/v9/?page=software v2.3.1

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access

search http://www.orthodb.org/v9/
download http://www.orthodb.org/v9/?page=filelist

Other Web Services

OrthoDB API http://www.orthodb.org/v9/?page=api


Publications

OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011.

Waterhouse RM., Zdobnov EM., Tegenfeldt F., Li J., Kriventseva EV.,
Nucleic Acids Res. 2011

View Paper (PubMed) View Publication

OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software.

Kriventseva EV,Tegenfeldt F,Petty TJ,Waterhouse RM,Simao FA,Pozdnyakov IA,Ioannidis P,Zdobnov EM
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

Maintains

Grant Number(s)

  • 31003A-125350 (Swiss National Sciences Foundation (SNCF))

  • 31003A_143936 (Swiss National Sciences Foundation (SNCF))

  • PDFMP3_137064 (Swiss National Sciences Foundation (SNCF))