Drosophila gross anatomy
Abbreviation: FB-BT
Homepage http://flybase.org/vocabularies
Countries that developed this resource United Kingdom
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: FB-BT; Drosophila gross anatomy; DOI: https://doi.org/10.25504/FAIRsharing.y2qkst; Last edited: May 1, 2020, 4:16 p.m.; Last accessed: Sep 19 2020 3:29 a.m.
Record updated: April 28, 2020, 4:48 p.m. by The FAIRsharing Team.
| help | https://github.com/FlyBase/drosophila-an ... |
| online documentation | https://github.com/FlyBase/drosophila-an ... |
Additional Information
| Contact | Clare Pilgrim ORCID |
External Links
| Bioportal | http://bioportal.bioontology.org/ontologies/FB-BT |
No XSD schemas defined
Conditions of Use
Data Access
| Download | https://github.com/FlyBase/drosophila-anatomy-developmental-ontology/w ... |
The Drosophila anatomy ontology
Costa M., Reeve S., Grumbling G., Osumi-Sutherland D.
Journal of Biomedical Semantics 2013
A strategy for building neuro-anatomy ontologies
Osumi-Sutherland D., Reeve S., Mungall C., Ruttenberg A. Neuhaus F, Jefferis G.S.X.E, Armstrong J.D.
Bioinformatics 2012
The Virtual Fly Brain Browser and Query Interface
Milyaev N., Osumi-Sutherland D., Reeve S., Burton N., Baldock R.A., Armstrong J.D.
Bioinformatics 2012
FlyBase: anatomical data, images and queries
Grumbling G., Strelets V., The FlyBase Consortium
Nucleic Acids Research 2006
View in BioPortal.
Reporting Guidelines
No guidelines defined
Terminology Artifacts
Models and Formats
No syntax standards defined
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
Genetic, genomic and molecular information pertaining to the model organism Drosophila melanogaster and related sequences. This database also contains information relating to human disease models in Drosophila, the use of transgenic constructs containing sequence from other organisms in Drosophila, and information on where to buy Drosophila strains and constructs.
Bgee DataBase for Gene Expression Evolution
Bgee is a database to retrieve and compare gene expression patterns in multiple animal species, produced from multiple data types (RNA-Seq, Affymetrix, in situ hybridization, and EST data). Bgee is based exclusively on curated "normal", healthy, expression data (e.g., no gene knock-out, no treatment, no disease), to provide a comparable reference of normal gene expression. Bgee produces calls of presence/absence of expression, and of differential over-/under-expression, integrated along with information of gene orthology, and of homology between organs. This allows comparisons of expression patterns between species.
Virtual Fly Brain
VFB is an interactive tool for neurobiologists to explore the detailed neuroanatomy, neuron connectivity and gene expression of Drosophila melanogaster. Our goal is to make it easier for researchers to find relevant anatomical information and reagents. We integrate the neuroanatomical and expression data from the published literature, as well as image datasets onto the same brain template, making it possible to run cross searches, find similar neurons and compare image data on our 3D Viewer.
OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.
Regulatory Element Database for Drosophila
REDfly is a curated collection of known Drosophila transcriptional cis-regulatory modules (CRMs) and transcription factor binding sites (TFBSs). REDfly seeks to include all experimentally verified fly regulatory elements along with their DNA sequence, their associated genes, and the expression patterns they direct.
This record is not implemented by any policy.
Record Maintainer
This record is maintained by ClarePilgrim ORCID
Funds
Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)
National Human Genome Research Institute (NHGRI), Bethesda, MD, USA (Government body)
The Wellcome Trust, UK (Charitable foundation)
Maintains
FBbt administrators (FlyBase) (Consortium)
FlyBase administrators (Consortium)
Virtual Fly Brain (Consortium)
Grant Number(s)
BB/G02233X/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)
