Ontology of Genes and Genomes
How to cite this record FAIRsharing.org: OGG; Ontology of Genes and Genomes; DOI: https://doi.org/10.25504/FAIRsharing.zmx7nn; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 16 2019 4:18 p.m.
Record added: Oct. 24, 2017, 9:41 a.m.
Record updated: Feb. 27, 2018, 2:35 p.m. by The FAIRsharing Team.
Edits to 'https://fairsharing.org/FAIRsharing.zmx7nn' by 'The FAIRsharing Team' at 14:35, 27 Feb 2018 (approved): 'description' has been modified: Before: OGG is a biological ontology in the area of genes and genomes. OGG uses the Basic Formal Ontology (BFO) as its upper level ontology. This OGG document contains the genes and genomes of a list of selected organisms, including human, two viruses (HIV and influenza virus), and bacteria (B. melitensis strain 16M, E. coli strain K-12 substrain MG1655, M. tuberculosis strain H37Rv, and P. aeruginosa strain PAO1). More OGG information for other organisms (e.g., mouse, zebrafish, fruit fly, yeast, etc.) may be found in other OGG subsets. After: OGG is a biological ontology in the area of genes and genomes. OGG uses the Basic Formal Ontology (BFO) as its upper level ontology. This OGG document contains the genes and genomes of a list of selected organisms. Each gene in OGG has over 10 annotation items, includes gene-associated Gene Ontology (GO) and PubMed article information. OGG has represented genes in human|two viruses|and four bacteria. Additionally|7 OGG subsets are developed to represent genes and genomes of 7 model systems including mouse|fruit fly|zebrafish|yeast|A. thaliana|C. elegans|and P. falciparum.
No XSD schemas defined
Conditions of UseApplies to: Data use
OGG: a biological ontology for representing genes and genomes in specific organisms
He Y, Liu Y, Zhao B.
Proceedings of the 5th International Conference on Biomedical Ontologies (ICBO), Houston, Texas, USA. Pages 13-20 2014
No guidelines defined
Models and Formats
No syntax standards defined
No identifier schema standards defined
No metrics standards defined
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.
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National Institutes of Health (NIH), Bethesda, MD, USA (Government body)
R01AI081062 (National Institutes of Health (NIH), Bethesda, MD, USA)