standards > reporting guideline > DOI:10.25504/FAIRsharing.zvrep1


ready Minimum Information about a MARKer gene Sequence

Abbreviation: MIxS - MIMARKS


General Information
MIMARKS is the metadata reporting standard of the Genomic Standards Consortium that covers marker gene sequences from environmental surveys or individual organisms



How to cite this record FAIRsharing.org: MIxS - MIMARKS; Minimum Information about a MARKer gene Sequence; DOI: https://doi.org/10.25504/FAIRsharing.zvrep1; Last edited: Feb. 22, 2018, 2:02 p.m.; Last accessed: Nov 17 2018 10:13 p.m.


This record is maintained by Genomic Standards Consortium  (pyilmaz)

Record updated: June 13, 2017, 11:45 a.m. by The FAIRsharing Team.





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Publications

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.

Yilmaz P,Kottmann R,Field D,Knight R,Cole JR,Amaral-Zettler L,Gilbert JA,Karsch-Mizrachi I,Johnston A,Cochrane G,Vaughan R,Hunter C,Park J,Morrison N,Rocca-Serra P,Sterk P,Arumugam M,Bailey M,Baumgartner L,Birren BW,Blaser MJ,Bonazzi V,Booth T,Bork P,Bushman FD,Buttigieg PL,Chain PS,Charlson E,Costello EK,Huot-Creasy H,Dawyndt P,DeSantis T,Fierer N,Fuhrman JA,Gallery RE,Gevers D,Gibbs RA,San Gil I,Gonzalez A,Gordon JI,Guralnick R,Hankeln W,Highlander S,Hugenholtz P,Jansson J,Kau AL,Kelley ST,Kennedy J,Knights D,Koren O,Kuczynski J,Kyrpides N,Larsen R,Lauber CL,Legg T,Ley RE,Lozupone CA,Ludwig W,Lyons D,Maguire E,Methe BA,Meyer F,Muegge B,Nakielny S,Nelson KE,Nemergut D,Neufeld JD,Newbold LK,Oliver AE,Pace NR,Palanisamy G,Peplies J,Petrosino J,Proctor L,Pruesse E,Quast C,Raes J,Ratnasingham S,Ravel J,Relman DA,Assunta-Sansone S,Schloss PD,Schriml L,Sinha R,Smith MI,Sodergren E,Spo A,Stombaugh J,Tiedje JM,Ward DV,Weinstock GM,Wendel D,White O,Whiteley A,Wilke A,Wortman JR,Yatsunenko T,Glockner FO
Nat Biotechnol 2011

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Implementing Databases (1)
Sequence Read Archive
The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms Data submitted to SRA. It is organized using a metadata model consisting of six objects: study, sample, experiment, run, analysis and submission. The SRA study contains high-level information including goals of the study and literature references, and may be linked to the INSDC BioProject database.

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