Edits to 'https://fairsharing.org/FAIRsharing.3etvdn' by 'The FAIRsharing Team' at 16:22, 01 Mar 2021 (approved):
'organizations' has been modified:
Before:
National Institute of Allergy and Infectious Diseases (NIAD), Bethesda, MD, USA|http://www.niaid.nih.gov/|Funds
National Institutes of Health (NIH), Bethesda, MD, USA|https://www.nih.gov/|Funds
Bioinformatics Resource Centers, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA|https://www.niaid.nih.gov/research/bioinformatics-resource-centers|Maintains
After:
National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA|https://www.niaid.nih.gov/|Funds
The Wellcome Trust, UK|https://wellcome.ac.uk/|Maintains,Funds
Bioinformatics Resource Centers, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA|https://www.niaid.nih.gov/research/bioinformatics-resource-centers|Maintains
Added:
National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA|https://www.niaid.nih.gov/|Funds
The Wellcome Trust, UK|https://wellcome.ac.uk/|Maintains,Funds
Removed:
National Institute of Allergy and Infectious Diseases (NIAD), Bethesda, MD, USA|http://www.niaid.nih.gov/|Funds
National Institutes of Health (NIH), Bethesda, MD, USA|https://www.nih.gov/|Funds
'grants' has been modified:
Before:
After:
212929/Z/18/Z
218288/Z/19/Z
HHSN75N93019C00077
Added:
212929/Z/18/Z
218288/Z/19/Z
HHSN75N93019C00077
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.3etvdn' by 'The FAIRsharing Team' at 14:35, 01 Mar 2021 (approved):
'organizations' has been modified:
Before:
National Institute of Allergy and Infectious Diseases (NIAD), Bethesda, MD, USA|http://www.niaid.nih.gov/|Funds
National Institutes of Health (NIH), Bethesda, MD, USA|https://www.nih.gov/|Funds
United States Department of Health and Human Services|http://www.hhs.gov/|Maintains
VectorBase|https://www.vectorbase.org|Maintains
After:
National Institute of Allergy and Infectious Diseases (NIAD), Bethesda, MD, USA|http://www.niaid.nih.gov/|Funds
National Institutes of Health (NIH), Bethesda, MD, USA|https://www.nih.gov/|Funds
Bioinformatics Resource Centers, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA|https://www.niaid.nih.gov/research/bioinformatics-resource-centers|Maintains
Added:
Bioinformatics Resource Centers, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA|https://www.niaid.nih.gov/research/bioinformatics-resource-centers|Maintains
Removed:
United States Department of Health and Human Services|http://www.hhs.gov/|Maintains
VectorBase|https://www.vectorbase.org|Maintains
'related_databases' has been modified:
Before:
FlyBase
Eukaryotic Pathogen, Vector and Host Informatics Resource
After:
FlyBase
Fungal and Oomycete genomics resource
CryptoDB
Eukaryotic Pathogen, Vector and Host Informatics Resource
GiardiaDB
MicrosporidiaDB
PlasmoDB
Toxoplasma Genomics Resource
TrichDB
TriTrypDB
AmoebaDB
ClinEpiDB
Added:
Fungal and Oomycete genomics resource
CryptoDB
GiardiaDB
MicrosporidiaDB
PlasmoDB
Toxoplasma Genomics Resource
TrichDB
TriTrypDB
AmoebaDB
ClinEpiDB
Removed:
'supportLinks' has been modified:
Before:
FAQ|https://www.vectorbase.org/faqs
email|info@vectorbase.org
help|https://www.vectorbase.org/navigation/help
mailing list|https://mail.vectorbase.org/mailman/listinfo/news
training|https://www.vectorbase.org/tutorials
twitter|@VectorBase
After:
email|info@vectorbase.org
help|https://vectorbase.org/vectorbase/app/static-content/landing.html
twitter|@VectorBase
Added:
help|https://vectorbase.org/vectorbase/app/static-content/landing.html
Removed:
FAQ|https://www.vectorbase.org/faqs
help|https://www.vectorbase.org/navigation/help
mailing list|https://mail.vectorbase.org/mailman/listinfo/news
training|https://www.vectorbase.org/tutorials
'description' has been modified:
Before: VectorBase is a web-accessible data repository for information about invertebrate vectors of human pathogens. VectorBase annotates and maintains vector genomes providing an integrated resource for the research community. Currently, VectorBase contains genome information for 38 organisms including Anopheles gambiae, a vector for the Plasmodium protozoan agent causing malaria, and Aedes aegypti, a vector for the flaviviral agents causing Yellow fever and Dengue fever. Recent additions include large scale variant (SNP) datasets and population genetics data (genotype/phenotype).
After: VectorBase is a web-accessible data repository for information about invertebrate vectors of human pathogens. VectorBase annotates and maintains vector genomes (as well as a number of non-vector genomes for comparative analysis) providing an integrated resource for the research community. VectorBase contains genome information for organisms such as Anopheles gambiae, a vector for the Plasmodium protozoan agent causing malaria, and Aedes aegypti, a vector for the flaviviral agents causing Yellow fever and Dengue fever. Hosted data range from genome assemblies with annotated gene features, transcript and protein expression data to population genetics including variation and insecticide-resistance phenotypes.
'licences' has been modified:
Before:
Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0|http://opendatacommons.org/licenses/pddl/1.0/|Data
Attribution required||Data
Publicly available data||Data
After:
VEuPathDB Data Submission and Release Policies|https://static-content.veupathdb.org/documents/VEuPathDB_Data_Sub_Release_policy_rev_02April2020.pdf|Data
Added:
VEuPathDB Data Submission and Release Policies|https://static-content.veupathdb.org/documents/VEuPathDB_Data_Sub_Release_policy_rev_02April2020.pdf|Data
Removed:
Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0|http://opendatacommons.org/licenses/pddl/1.0/|Data
Attribution required||Data
Publicly available data||Data
'tools' has been modified:
Before:
Biomart|version 0.7|http://biomart.vectorbase.org/biomart/martview/14e30d4b8fd100ad5013e123702144fb
BLAST||https://www.vectorbase.org/blast
PopBio map||https://www.vectorbase.org/popbio
ClustalW||https://www.vectorbase.org/clustalw
Galaxy|Galaxy 101 |https://www.vectorbase.org/galaxy
Apollo|Version 2.0.2|https://www.vectorbase.org/webapollo
HMMER||https://www.vectorbase.org/hmmer
Ensembl genome browser||https://www.vectorbase.org/species.html
After:
Added:
Removed:
Biomart|version 0.7|http://biomart.vectorbase.org/biomart/martview/14e30d4b8fd100ad5013e123702144fb
BLAST||https://www.vectorbase.org/blast
PopBio map||https://www.vectorbase.org/popbio
ClustalW||https://www.vectorbase.org/clustalw
Galaxy|Galaxy 101 |https://www.vectorbase.org/galaxy
Apollo|Version 2.0.2|https://www.vectorbase.org/webapollo
HMMER||https://www.vectorbase.org/hmmer
Ensembl genome browser||https://www.vectorbase.org/species.html
'onto_disciplines' has been modified:
Before:
Life Science
Ontology and Terminology
Population Dynamics
Population Genetics
After:
Comparative Genomics
Functional Genomics
Genomics
Population Dynamics
Population Genetics
Added:
Comparative Genomics
Functional Genomics
Genomics
Removed:
Life Science
Ontology and Terminology
'onto_domains' has been modified:
Before:
Annotation
DNA sequence
DNA structural variation
GO-term enrichment report
Gene expression data
gene
genome
genotype
insecticide resistance
karyotype
pathogen
phenotype
protein
structure
After:
Annotation
DNA sequence
DNA structural variation
GO-term enrichment report
Gene expression data
Structure
gene
genome
genotype
insecticide resistance
karyotype
pathogen
phenotype
protein
structure
Added:
Structure
Removed:
'contact' has been modified:
Before: Help email
After: General Contact
'grants' has been modified:
Before:
HHSN272201400029C
After:
Added:
Removed:
HHSN272201400029C
'publications' has been modified:
Before:
VectorBase: a data resource for invertebrate vector genomics.|Lawson D., Arensburger P., Atkinson P., Besansky NJ., Bruggner RV., Butler R., Campbell KS., Christophides GK., Christley S., Dialynas E., Hammond M., Hill CA., Konopinski N., Lobo NF., MacCallum RM., Madey G., Megy K., Meyer J., Redmond S., Severson DW., Stinson EO., Topalis P., Birney E., Gelbart WM., Kafatos FC., Louis C., Collins FH., |Nucleic Acids Res.|2009
After:
VectorBase: a data resource for invertebrate vector genomics.|Lawson D., Arensburger P., Atkinson P. et al.|Nucleic Acids Res.|2009
VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases.|Giraldo-Calderon GI,Emrich SJ,MacCallum RM,Maslen G,Dialynas E,Topalis P,Ho N,Gesing S,Madey G,Collins FH,Lawson D|Nucleic Acids Res|2014
Added:
VectorBase: a data resource for invertebrate vector genomics.|Lawson D., Arensburger P., Atkinson P. et al.|Nucleic Acids Res.|2009
VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases.|Giraldo-Calderon GI,Emrich SJ,MacCallum RM,Maslen G,Dialynas E,Topalis P,Ho N,Gesing S,Madey G,Collins FH,Lawson D|Nucleic Acids Res|2014
Removed:
VectorBase: a data resource for invertebrate vector genomics.|Lawson D., Arensburger P., Atkinson P., Besansky NJ., Bruggner RV., Butler R., Campbell KS., Christophides GK., Christley S., Dialynas E., Hammond M., Hill CA., Konopinski N., Lobo NF., MacCallum RM., Madey G., Megy K., Meyer J., Redmond S., Severson DW., Stinson EO., Topalis P., Birney E., Gelbart WM., Kafatos FC., Louis C., Collins FH., |Nucleic Acids Res.|2009
'dataProcesses' has been modified:
Before:
Download, data access, https://www.vectorbase.org/downloads
Expression brower, data access, https://www.vectorbase.org/expression-browser
Genome browser, data access, https://www.vectorbase.org/species.html
Manual and automated curation, data curation,
Ontology browser, data access, https://www.vectorbase.org/ontology-browser
PopBio , data access, https://www.vectorbase.org/popbio/map/
After:
Download, data release, https://vectorbase.org/vectorbase/app/downloads/
Genome browser (JBrowse), data access, https://vectorbase.org/vectorbase/app/jbrowse?data=/a/service/jbrowse/tracks/default
Search by Gene ID, data access, https://vectorbase.org/vectorbase/app/search/transcript/GeneByLocusTag
Submit Data, data curation, https://vectorbase.org/vectorbase/app/static-content/dataSubmission.html
Galaxy, data access, https://vectorbase.org/vectorbase/app/galaxy-orientation
Added:
Download, data release, https://vectorbase.org/vectorbase/app/downloads/
Genome browser (JBrowse), data access, https://vectorbase.org/vectorbase/app/jbrowse?data=/a/service/jbrowse/tracks/default
Search by Gene ID, data access, https://vectorbase.org/vectorbase/app/search/transcript/GeneByLocusTag
Submit Data, data curation, https://vectorbase.org/vectorbase/app/static-content/dataSubmission.html
Galaxy, data access, https://vectorbase.org/vectorbase/app/galaxy-orientation
Removed:
Download, data access, https://www.vectorbase.org/downloads
Expression brower, data access, https://www.vectorbase.org/expression-browser
Genome browser, data access, https://www.vectorbase.org/species.html
Manual and automated curation, data curation,
Ontology browser, data access, https://www.vectorbase.org/ontology-browser
PopBio , data access, https://www.vectorbase.org/popbio/map/
'accessPoints' has been modified:
Before:
After:
REST|https://vectorbase.org/vectorbase/app/static-content/content/VectorBase/webServices.html|Web Services Documentation
Added:
REST|https://vectorbase.org/vectorbase/app/static-content/content/VectorBase/webServices.html|Web Services Documentation
Removed:
'homepage' has been modified:
Before: https://www.vectorbase.org
After: https://vectorbase.org/vectorbase/app
Edits to 'https://fairsharing.org/FAIRsharing.3etvdn' by 'The FAIRsharing Team' at 11:16, 21 Nov 2018 (approved):
'domains' has been modified:
Before:
Annotation
DNA sequence data
DNA structural variation To remove
Gene
Gene Ontology (GO) enrichment
Gene expression data
Genome
Genotype
Insecticide resistance
Karyotype
Life Science
Ontology and terminology
Pathogen
Phenotype
Population dynamics
Population genetics
Protein
Structure
After:
Annotation
DNA sequence data
DNA structural variation
Gene
Gene Ontology (GO) enrichment
Gene expression data
Genome
Genotype
Insecticide resistance
Karyotype
Life Science
Ontology and terminology
Pathogen
Phenotype
Population dynamics
Population genetics
Protein
Structure
Added:
DNA structural variation
Removed:
DNA structural variation To remove
Edits to 'https://fairsharing.org/FAIRsharing.3etvdn' by 'The FAIRsharing Team' at 10:56, 21 Nov 2018 (approved):
'domains' has been modified:
Before:
Annotation
DNA structural variation
Gene
Gene Ontology (GO) enrichment
Gene expression data
Genome
Genotype
Insecticide resistance
Karyotype
Life Science
Ontology and terminology
Pathogen
Phenotype
Population dynamics
Population genetics
Protein
Structure
After:
Annotation
DNA sequence data
DNA structural variation
Gene
Gene Ontology (GO) enrichment
Gene expression data
Genome
Genotype
Insecticide resistance
Karyotype
Life Science
Ontology and terminology
Pathogen
Phenotype
Population dynamics
Population genetics
Protein
Structure
Added:
DNA sequence data
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.3etvdn' by 'lawson' at 21:33, 27 Mar 2017 (approved):
'name' has been modified:
Before: Invertebrate Vectors of Human Pathogens
After: VectorBase