Edits to 'https://fairsharing.org/FAIRsharing.5vtYGG' by 'The FAIRsharing Team' at 13:57, 09 Jan 2019 (approved):
'organizations' has been modified:
Before:
German Network for Bioinformatics Infrastructure (de.NBI), Germany|https://www.denbi.de|Funds
Jacobs University gGmbH, Bremen, Germany|http://www.jacobs-university.de|Funds
Max Planck Institute for Marine Microbiology (MPIMM), Bremen, Germany|http://www.mpi-bremen.de/Institut.html|Funds
After:
German Network for Bioinformatics Infrastructure (de.NBI), Germany|https://www.denbi.de|Funds
Jacobs University gGmbH, Bremen, Germany|http://www.jacobs-university.de|Funds
Max Planck Institute for Marine Microbiology (MPIMM), Bremen, Germany|http://www.mpi-bremen.de/Institut.html|Funds
Microbial Genomics and Bioinformatics Research Group, Max Plank Institute for Marine Microbiology (MPIMM), Bremen, Germany|https://www.mpi-bremen.de/en/Microbial-Genomics-Group.html|Maintains
Ribocon GmbH, Bremen, Germany|https://www.ribocon.com/|Maintains
Added:
Microbial Genomics and Bioinformatics Research Group, Max Plank Institute for Marine Microbiology (MPIMM), Bremen, Germany|https://www.mpi-bremen.de/en/Microbial-Genomics-Group.html|Maintains
Ribocon GmbH, Bremen, Germany|https://www.ribocon.com/|Maintains
Removed:
'supportLinks' has been modified:
Before:
email|contact@arb-silva.de
online documentation|https://www.arb-silva.de/documentation/
After:
FAQ|https://www.arb-silva.de/documentation/faqs/
email|contact@arb-silva.de
help|https://www.arb-silva.de/documentation/testprime-tutorial/
help|https://www.arb-silva.de/documentation/act-tutorial/
help|https://www.arb-silva.de/documentation/testprobe-tutorial/
help|https://www.arb-silva.de/documentation/search-tutorial/
online documentation|https://www.arb-silva.de/documentation/
twitter|@ARB_SILVA
Added:
FAQ|https://www.arb-silva.de/documentation/faqs/
help|https://www.arb-silva.de/documentation/testprime-tutorial/
help|https://www.arb-silva.de/documentation/act-tutorial/
help|https://www.arb-silva.de/documentation/testprobe-tutorial/
help|https://www.arb-silva.de/documentation/search-tutorial/
twitter|@ARB_SILVA
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.5vtYGG' by 'The FAIRsharing Team' at 16:47, 17 Oct 2018 (approved):
'description' has been modified:
Before: SILVA is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services. In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline, which partly or fully support microbial ecologists in their diversity analysis needs.
With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA curation team is now part of Bergey?s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database).
SILVA is a Core Data Ressource of ELIXIR.
After: SILVA is a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains alongside supplementary online services. In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline.
With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. The SILVA curation team is now part of Bergey?s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database).
SILVA is an ELIXIR Core Data Resource.
Edits to 'https://fairsharing.org/FAIRsharing.5vtYGG' by 'The FAIRsharing Team' at 09:57, 06 Sep 2018 (approved):
'domains' has been modified:
Before:
Multiple sequence alignment
Next generation DNA sequencing
Oligonucleotide probe annotation
Phylogeny
Ribosomal RNA (rRNA)
Taxonomic classification
After:
Life Science
Multiple sequence alignment
Next generation DNA sequencing
Oligonucleotide probe annotation
Phylogeny
Ribosomal RNA (rRNA)
Taxonomic classification
Added:
Life Science
Removed:
'licences' has been modified:
Before:
After:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Added:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Removed:
'supportLinks' has been modified:
Before:
email|contact@arb-silva.de
After:
email|contact@arb-silva.de
online documentation|https://www.arb-silva.de/documentation/
Added:
online documentation|https://www.arb-silva.de/documentation/
Removed:
'description' has been modified:
Before: SILVA is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services.In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline, which partly or fully support microbial ecologists in their diversity analysis needs.
With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA curation team is now part of Bergey?s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database).
SILVA is a Core Data Ressource of ELIXIR.
After: SILVA is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services. In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline, which partly or fully support microbial ecologists in their diversity analysis needs.
With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA curation team is now part of Bergey?s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database).
SILVA is a Core Data Ressource of ELIXIR.
'dataProcesses' has been modified:
Before:
After:
Data Download
Search
Browse
Added:
Data Download
Search
Browse
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.5vtYGG' by 'FOG' at 15:32, 05 Sep 2018 (approved):
'description' has been modified:
Before: SILVA is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services.In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline, which partly or fully support microbial ecologists in their diversity analysis needs.
With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA curation team is now part of Bergey?s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database).
After: SILVA is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services.In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline, which partly or fully support microbial ecologists in their diversity analysis needs.
With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA curation team is now part of Bergey?s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database).
SILVA is a Core Data Ressource of ELIXIR.
Edits to 'https://fairsharing.org/FAIRsharing.5vtYGG' by 'FOG' at 15:31, 05 Sep 2018 (approved):
'organizations' has been modified:
Before:
German Network for Bioinformatics Infrastructure (de.NBI), Germany|https://www.denbi.de|Funds
After:
German Network for Bioinformatics Infrastructure (de.NBI), Germany|https://www.denbi.de|Funds
Max Planck Institute for Marine Microbiology (MPIMM), Bremen, Germany|http://www.mpi-bremen.de|Funds
Jacobs University Bremen gGmbH|http://www.jacobs-university.de|Funds
Added:
Max Planck Institute for Marine Microbiology (MPIMM), Bremen, Germany|http://www.mpi-bremen.de|Funds
Jacobs University Bremen gGmbH|http://www.jacobs-university.de|Funds
Removed:
'related_databases' has been modified:
Before:
Bacterial Diversity Metadatabase
After:
Added:
Removed:
Bacterial Diversity Metadatabase
'tools' has been modified:
Before:
After:
SILVAngs||https://www.arb-silva.de/ngs
TestProbe||https://www.arb-silva.de/search/testprobe/
TestPrime||https://www.arb-silva.de/search/testprime/
ACT: Alignment, Classification and Tree Service||https://www.arb-silva.de/act
Added:
SILVAngs||https://www.arb-silva.de/ngs
TestProbe||https://www.arb-silva.de/search/testprobe/
TestPrime||https://www.arb-silva.de/search/testprime/
ACT: Alignment, Classification and Tree Service||https://www.arb-silva.de/act
Removed:
'description' has been modified:
Before: SILVA provides comprehensive, quality checked and regularly updated datasets of aligned small (16S/18S, SSU) and large subunit (23S/28S, LSU) ribosomal RNA (rRNA) sequences for all three domains of life (Bacteria, Archaea and Eukarya).
After: SILVA is a comprehensive web resource for up to date, quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains and supplementary online services.In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline, which partly or fully support microbial ecologists in their diversity analysis needs.
With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA curation team is now part of Bergey?s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database).
'publications' has been modified:
Before:
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.|Quast C,Pruesse E,Yilmaz P,Gerken J,Schweer T,Yarza P,Peplies J,Glockner FO|Nucleic Acids Res|2012
After:
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.|Quast C,Pruesse E,Yilmaz P,Gerken J,Schweer T,Yarza P,Peplies J,Glockner FO|Nucleic Acids Res|2012
The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks.|Yilmaz P,Parfrey LW,Yarza P,Gerken J,Pruesse E,Quast C,Schweer T,Peplies J,Ludwig W,Glockner FO|Nucleic Acids Res|2013
25 years of serving the community with ribosomal RNA gene reference databases and tools.|Glockner FO,Yilmaz P,Quast C,Gerken J,Beccati A,Ciuprina A,Bruns G,Yarza P,Peplies J,Westram R,Ludwig W|J Biotechnol|2017
Added:
The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks.|Yilmaz P,Parfrey LW,Yarza P,Gerken J,Pruesse E,Quast C,Schweer T,Peplies J,Ludwig W,Glockner FO|Nucleic Acids Res|2013
25 years of serving the community with ribosomal RNA gene reference databases and tools.|Glockner FO,Yilmaz P,Quast C,Gerken J,Beccati A,Ciuprina A,Bruns G,Yarza P,Peplies J,Westram R,Ludwig W|J Biotechnol|2017
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.5vtYGG' by 'FOG' at 15:09, 05 Sep 2018 (approved):
'domains' has been modified:
Before:
16S ribosomal RNA (rRNA)
Multiple sequence alignment
Oligonucleotide probe annotation
Phylogeny
Taxonomic classification
After:
Multiple sequence alignment
Next generation DNA sequencing
Oligonucleotide probe annotation
Phylogeny
Ribosomal RNA (rRNA)
Taxonomic classification
Added:
Next generation DNA sequencing
Ribosomal RNA (rRNA)
Removed:
16S ribosomal RNA (rRNA)
'taxonomies' has been modified:
Before:
After:
Archaea
Bacteria
Eukaryota
Added:
Archaea
Bacteria
Eukaryota
Removed:
'contactORCID' has been modified:
Before:
After: 0000-0001-8528-9023