databases > DOI:10.25504/FAIRsharing.651n9j
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ready Electron Microscopy Data Bank

Abbreviation:EMDB

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General Information
Cryo-electron microscopy reconstruction methods are uniquely able to reveal structures of many important macromolecules and macromolecular complexes. The Electron Microscopy Data Bank (EMDB) is a public repository for electron microscopy density maps of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, electron tomography, and electron (2D) crystallography. The EMDB was founded at EBI in 2002, under the leadership of Kim Henrick. Since 2007 it has been operated jointly by the PDBe, and the Research Collaboratory for Structural Bioinformatics (RCSB PDB) as a part of EMDataBank which is funded by a joint NIH grant to PDBe, the RCSB and the National Center for Macromolecular Imaging (NCMI).

Homepage https://www.ebi.ac.uk/pdbe/emdb/

Countries that developed this resource Austria , Belgium , Croatia , Czech Republic , Denmark , Finland , France , Germany , Greece , Hungary , Iceland , Israel , Italy , Lithuania , Luxembourg , Malta , Montenegro , Netherlands , Norway , Portugal , Republic of Ireland , Slovakia , Spain , Sweden , Switzerland , United Kingdom , United States

Created in 2002

Taxonomic range





How to cite this record FAIRsharing.org: EMDB; Electron Microscopy Data Bank; DOI: https://doi.org/10.25504/FAIRsharing.651n9j; Last edited: March 27, 2020, 11:08 p.m.; Last accessed: Sep 28 2021 8:52 a.m.


This record is maintained by ardan

Record updated: March 27, 2020, 11:07 p.m. by The FAIRsharing Team.

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In Collections
Data Citation Implementation
EOSC-Life
ELIXIR Core Data Resources and Deposition Databases
COVID-19 Resources
RDA Covid-19 WG Resources
TDR COVID-19 Participant-level data sharing platforms & registries

Support

General

FAQ FAQ
online documentation 3DEM History and Genealogy
online documentation EMDB Data Model
online documentation EMDB Statistics
online documentation Policies

Additional Information

Contact Ardan Patwardhan   ORCID


Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Release

Download (FTP) ftp://ftp.ebi.ac.uk/pub/databases/emdb

Data Curation

Data submission https://deposit-pdbe.wwpdb.org/deposition/

Data Access

Browse Latest Maps https://www.ebi.ac.uk/pdbe/emdb/release/map/
Advanced search https://www.ebi.ac.uk/pdbe/emdb/searchForm.html/
Browse https://www.ebi.ac.uk/pdbe/emdb/browse.html/
Browse Latest Header Releases https://www.ebi.ac.uk/pdbe/emdb/release/header/
Browse Latest Updates https://www.ebi.ac.uk/pdbe/emdb/release/update/



Publications

EMDataBank.org: unified data resource for CryoEM

Lawson CL, Baker ML, Best C, Bi C, Dougherty M, Feng P, van Ginkel G, Devkota B, Lagerstedt I, Ludtke SJ, Newman RH, Oldfield TJ, Rees I, Sahni G, Sala R, Velankar S, Warren J, Westbrook JD, Henrick K, Kleywegt GJ, Berman HM, Chiu W.
Nucleic Acids Res. 2011

View Paper (PubMed) View Publication

New electron microscopy database and deposition system

Tagari, M. Newman, R. Chagoyen, M. Carazo, J. M. Henrick, K.
Trends in Biochemical Sciences 2002

View Paper (PubMed) View Publication

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