e-Mouse Atlas of Gene Expression
Abbreviation:EMAGE
Recommended
General Information
The e-Mouse Atlas of Gene Expression (EMAGE) is a freely available database of in situ gene expression patterns that allows users to perform online queries of mouse developmental gene expression. EMAGE is unique in providing both text-based descriptions of gene expression plus spatial maps of gene expression patterns. This mapping allows spatial queries to be accomplished alongside more traditional text-based queries.
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How to cite this record
FAIRsharing.org: EMAGE; e-Mouse Atlas of Gene Expression; DOI: https://doi.org/10.25504/FAIRsharing.6qr9jp;
Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Apr 11 2021 2:12 p.m.
Publication for citation
EMAGE mouse embryo spatial gene expression database: 2014 update.
Richardson L,Venkataraman S,Stevenson P,Yang Y,Moss J,Graham L,Burton N,Hill B,Rao J,Baldock RA,Armit C; Nucleic Acids Res ;
2013;
10.1093/nar/gkt1155;
Record added: April 20, 2016, 12:55 p.m.
Record updated:
March 17, 2021, 12:37 p.m. by The FAIRsharing Team.
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Edits to 'https://fairsharing.org/FAIRsharing.6qr9jp' by 'The FAIRsharing Team' at 12:37, 17 Mar 2021 (approved):
'related_databases' has been modified:
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e-Mouse Atlas
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MGI Mouse Gene Expression Database
Kyoto Encyclopedia of Genes and Genomes
e-Mouse Atlas
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MGI Mouse Gene Expression Database
Kyoto Encyclopedia of Genes and Genomes
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'supportLinks' has been modified:
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contact form|http://www.emouseatlas.org/emage/help/contact.html
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FAQ|https://www.emouseatlas.org/emage/help/faqs.php
contact form|https://www.emouseatlas.org/emage/help/contact.php
help|https://www.emouseatlas.org/emage/help/all_help.php
Added:
FAQ|https://www.emouseatlas.org/emage/help/faqs.php
contact form|https://www.emouseatlas.org/emage/help/contact.php
help|https://www.emouseatlas.org/emage/help/all_help.php
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contact form|http://www.emouseatlas.org/emage/help/contact.html
'description' has been modified:
Before: EMAGE is a database of in situ gene expression data in the mouse embryo. mRNA in situ hybridisation, protein immunohistochemistry, in situ transgenic reporter data, and in situ enhancer data is included. These are sourced from the community and curators take this data and describe it in a standardised way that allows data query and exchange. The description includes a text-based component but the unique aspect of EMAGE is its spatial annotation focus.
After: The e-Mouse Atlas of Gene Expression (EMAGE) is a freely available database of in situ gene expression patterns that allows users to perform online queries of mouse developmental gene expression. EMAGE is unique in providing both text-based descriptions of gene expression plus spatial maps of gene expression patterns. This mapping allows spatial queries to be accomplished alongside more traditional text-based queries.
'onto_disciplines' has been modified:
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Anatomy
Life Science
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Anatomy
Developmental Biology
Transcriptomics
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Developmental Biology
Transcriptomics
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Life Science
'onto_domains' has been modified:
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gene expression
life cycle stage
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Gene expression data
Model organisms
gene expression
immunohistochemistry
in-situ hybridization assay
life cycle stage
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Gene expression data
Model organisms
immunohistochemistry
in-situ hybridization assay
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'contact' has been modified:
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After: General Contact
'dataProcesses' has been modified:
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Data Curation Guide, data curation, https://www.emouseatlas.org/emage/about/data_curation.php
All Search Options, data access, https://www.emouseatlas.org/emage/search/all_search_tools.php
Added:
Data Curation Guide, data curation, https://www.emouseatlas.org/emage/about/data_curation.php
All Search Options, data access, https://www.emouseatlas.org/emage/search/all_search_tools.php
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'accessPoints' has been modified:
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Other|https://www.emouseatlas.org/emage/search/json.php|General Access with JSON results
REST|https://www.emouseatlas.org/emage/search/webservice.php|EMAGE API Documentation
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Other|https://www.emouseatlas.org/emage/search/json.php|General Access with JSON results
REST|https://www.emouseatlas.org/emage/search/webservice.php|EMAGE API Documentation
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'homepage' has been modified:
Before: http://www.emouseatlas.org/emage/home.php
After: https://www.emouseatlas.org/emage/home.php
Edits to 'https://fairsharing.org/FAIRsharing.6qr9jp' by 'The FAIRsharing Team' at 13:06, 06 Dec 2017 (approved):
'contactName' has been modified:
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None
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Access / Retrieve Data
Conditions of Use
Data Curation
Data Access
REST Web Services
Other Web Services
Publications
EMAGE mouse embryo spatial gene expression database: 2014 update.
Richardson L,Venkataraman S,Stevenson P,Yang Y,Moss J,Graham L,Burton N,Hill B,Rao J,Baldock RA,Armit C
Nucleic Acids Res 2013
View Paper (PubMed)
View Publication
Related Standards
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