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Genome Database for Rosaceae

Abbreviation:GDR

General Information

The Genome Database for Rosaceae (GDR) is a curated and integrated web-based relational database providing centralized access to Rosaceae genomics and genetics data and analysis tools to facilitate cross-species utilization of data.

Homepage http://www.rosaceae.org/

Countries that developed this resource United States

Created in 2003

Taxonomic range

Rosaceae

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: GDR; Genome Database for Rosaceae; DOI: https://doi.org/10.25504/FAIRsharing.6v96ma; Last edited: April 26, 2021, 3:57 p.m.; Last accessed: Sep 25 2021 2:17 a.m.

Record updated: April 20, 2021, 11:58 a.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.6v96ma' by 'The FAIRsharing Team' at 11:58, 20 Apr 2021 (approved):

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			Attribution required||Data
			Publicly available data||Data
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			GDR Attribution required|https://www.rosaceae.org/reference|Data
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			GDR Attribution required|https://www.rosaceae.org/reference|Data
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			Publicly available data||Data

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Edits to 'https://fairsharing.org/FAIRsharing.6v96ma' by 'The FAIRsharing Team' at 11:57, 21 Nov 2018 (approved):

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			Annotation
			DNA sequence data
			Gene
			Genome
			Genotype
			Life Science
			Messenger RNA (mRNA)
			Phenotype
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			Annotation
			DNA sequence data
			Gene
			Genome
			Genotype
			Life Science
			Messenger RNA (mRNA)
			Phenotype
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			Transcript
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Edits to 'https://fairsharing.org/FAIRsharing.6v96ma' by 'The FAIRsharing Team' at 23:04, 20 Aug 2016 (approved):

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			Dorrie Main
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In Collections

AgBioData

Tripal

Support

General

FAQ	https://www.rosaceae.org/gdr_faq
contact form	http://www.rosaceae.org/contact
Mailing List	None
online documentation	https://www.rosaceae.org/nomenclature/ge ...
online documentation	https://www.rosaceae.org/nomenclature/ge ...
training	http://www.rosaceae.org/tutorials
twitter	@GDR_news

Additional Information

Contact

Dorrie Main

Tools

BLAST	http://www.rosaceae.org/bio/content?title=&url=%2Fcgi-bin%2Fgdr%2Fgdr_ ...
Batch BLAST	https://www.rosaceae.org/tools/batch_blast
Breeders Toolbox	https://www.rosaceae.org/legacy/
CMap	https://www.rosaceae.org/tools/cmap
GDR Cyc Pathways	http://pathways.rosaceae.org/
Primer3	https://www.rosaceae.org/tools/primer3	4.0.0
Sequence Retrieval	https://www.rosaceae.org/retrieve/sequences
Synteny Viewer	https://www.rosaceae.org/synteny_viewer

Access / Retrieve Data

Conditions of Use

Applies to: Data use

GDR Attribution required

Data Curation

submit

https://www.rosaceae.org/data/submission

Data Access

Download	http://www.rosaceae.org/node/58
search	http://www.rosaceae.org/node/11
GBrowse	https://www.rosaceae.org/tools/cmap
JBrowse	https://www.rosaceae.org/tools/jbrowse

Publications

GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics data.

Jung S., Staton M., Lee T., Blenda A., Svancara R., Abbott A., Main D.,
Nucleic Acids Res. 2008

View Paper (PubMed) View Publication

GDR (Genome Database for Rosaceae): integrated web resources for Rosaceae genomics and genetics research.

Jung S., Jesudurai C., Staton M., Du Z., Ficklin S., Cho I., Abbott A., Tomkins J., Main D.,
BMC Bioinformatics 2004

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

FASTA Sequence Format

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

No related databases defined

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

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Maintains

Washington State University, USA (University)

Genome Database for Rosaceae

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