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ready Minimum Information About a Proteomics Experiment

Abbreviation: MIAPE


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General Information
MIAPE attempts to define the minimum set of information about whole proteomics experiments that would be required by a public repository.


In the following recommendations:



How to cite this record FAIRsharing.org: MIAPE; Minimum Information About a Proteomics Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8vv5fc; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: Oct 24 2021 11:31 a.m.

Publication for citation  The minimum information about a proteomics experiment (MIAPE). Taylor CF,Paton NW,Lilley KS et al.; Nat Biotechnol ; 2007; 10.1038/nbt1329;


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Record updated: Feb. 6, 2021, 10:27 a.m. by The FAIRsharing Team.

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The minimum information about a proteomics experiment (MIAPE).

Taylor CF,Paton NW,Lilley KS et al.
Nat Biotechnol 2007

View Paper (PubMed) View Publication


Related Databases (5)
PRoteomics IDEntifications database
The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence.

The Global Proteome Machine Database
The Global Proteome Machine Database (gpmDB holds the minimum amount of information necessary for common bioinformatics-related tasks (such as sequence assignment validation) rather than being a complete record of a proteomics experiment. It was also created to aid in the process of validating peptide MS/MS spectra as well as protein coverage patterns. Most of the data is held in a set of XML files: the database serves as an index to those files, allowing for rapid lookups and reduced database storage requirements.

World-2DPAGE Repository
A public standards-compliant repository for gel-based proteomics data linked to protein identification published in the literature. The repository is continuously extended, putting together a large collection of multi-species reference maps, with thousands of identified spots..

ProteomeXchange
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.

ProteoRed
Carlos III Networked Proteomics Platform, ProteoRed-ISCIII is a National Network for the coordination, integration and development of the Spanish Proteomics Facilities providing proteomics services for supporting Spanish researchers in the field of proteomics.


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