Minimum Information about a Molecular Interaction Experiment
Abbreviation: MIMIx
Homepage https://www.psidev.info/mimix
Countries that developed this resource Austria , Canada , European Union , France , Germany , Italy , Singapore , Switzerland , United Kingdom , United States
Created in 2007
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: MIMIx; Minimum Information about a Molecular Interaction Experiment; DOI: https://doi.org/10.25504/FAIRsharing.8z3xzh; Last edited: March 29, 2021, 11:10 a.m.; Last accessed: Apr 12 2021 11:54 p.m.
Publication for citation The minimum information required for reporting a molecular interaction experiment (MIMIx). Orchard S,Salwinski L,Kerrien S et al.; Nat Biotechnol ; 2007; 10.1038/nbt1324;
Record updated: March 29, 2021, 11:09 a.m. by The FAIRsharing Team.
online documentation | HUPO-PSI related documents |
Additional Information
Contact | General contact |
PSI-MI Validator | https://www.ebi.ac.uk/intact/validator/start.xhtml |
PSICQUIC | https://github.com/PSICQUIC |
No XSD schemas defined
Conditions of Use
Data Release
Download Specification | https://www.psidev.info/sites/default/files/2017-06/MIMIx-revision1-1- ... |
The minimum information required for reporting a molecular interaction experiment (MIMIx).
Orchard S,Salwinski L,Kerrien S et al.
Nat Biotechnol 2007
Reporting Guidelines
- Minimum Information about a Protein Affinity Reagent
- Minimum Information About a Proteomics Experiment
- MIAPE: Mass Spectrometry Quantification
- MIAPE: Mass Spectrometry Informatics
- MIAPE: Gel Informatics
- MIAPE: Gel Electrophoresis
- MIAPE: Capillary Electrophoresis
- MIAPE: Mass Spectrometry
- MIAPE: Column Chromatography
- Minimum Information About a Bioactive Entity
- Minimum Information about a Molecular Interaction Causal Statement
Terminology Artifacts
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
IntAct provides a freely available, open source database system and analysis tools for protein interaction data. All interactions are derived from literature curation or direct user submissions and are freely available.
Molecular INTeraction database
MINT focuses on experimentally verified protein-protein interactions mined from the scientific literature by expert curators. This resource uses the IntAct database framework to help reduce the effort of scientists and improve on IT development. MINT is an ELIXIR Core Resource.
Extracellular Matrix Interaction Database
MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.
Database of Interacting Proteins
The database of interacting protein (DIP) database stores experimentally determined interactions between proteins. It combines information from a variety of sources to create a single, consistent set of protein-protein interactions. The data stored within the DIP database were curated, both manually by expert curators and automatically using computational approaches that utilize the the knowledge about the protein-protein interaction networks extracted from the core DIP data.
ProteoRed
Carlos III Networked Proteomics Platform, ProteoRed-ISCIII is a National Network for the coordination, integration and development of the Spanish Proteomics Facilities providing proteomics services for supporting Spanish researchers in the field of proteomics.
- Rockefeller University Press - Journal Of Experimental Medicine - Data Deposition
- Springer Nature Research Data Policy Type 1
- Rockefeller University Press - Journal Of Cell Biology - Data Deposition
- Springer Nature Research Data Policy Type 2 (for life sciences)
- Springer Nature Research Data Policy Type 4
- Springer Nature Research Data Policy Type 3 (for life sciences)
- Springer Nature Research Data Policy Type 2
- Springer Nature Research Data Policy Type 3
- Springer Nature - Research Data Policies
- Scientific Data Data Policy
- EMBO Press Recommended Databases and Data Standards
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