databases > DOI:10.25504/FAIRsharing.9b7wvk
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ready STRING

General Information
STRING is a database of known and predicted protein interactions. The interactions include direct (physical) and indirect (functional) associations.

Homepage https://string-db.org/

Countries that developed this resource Germany

Created in 2000

Taxonomic range





How to cite this record FAIRsharing.org: STRING; STRING; DOI: https://doi.org/10.25504/FAIRsharing.9b7wvk; Last edited: March 19, 2021, 11:35 a.m.; Last accessed: Oct 17 2021 10:57 p.m.

Publication for citation  STRING v10: protein-protein interaction networks, integrated over the tree of life. Szklarczyk D,Franceschini A,Wyder S,Forslund K,Heller D,Huerta-Cepas J,Simonovic M,Roth A,Santos A,Tsafou KP,Kuhn M,Bork P,Jensen LJ,von Mering C; Nucleic Acids Res ; 2014; 10.1093/nar/gku1003;


Record updated: March 11, 2021, 5:40 p.m. by The FAIRsharing Team.

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Additional Information

TeSS training resources 

STRING exercises

Cytoscape stringApp exercises



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Access / Retrieve Data

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Applies to: Data use

Data Versioning

Data Release

Data Access


REST Web Services



Publications

STRING 8--a global view on proteins and their functional interactions in 630 organisms.

Jensen LJ., Kuhn M., Stark M., Chaffron S., Creevey C., Muller J., Doerks T., Julien P., Roth A., Simonovic M., Bork P., von Mering C.,
Nucleic Acids Res. 2009

View Paper (PubMed)

STRING v10: protein-protein interaction networks, integrated over the tree of life.

Szklarczyk D,Franceschini A,Wyder S,Forslund K,Heller D,Huerta-Cepas J,Simonovic M,Roth A,Santos A,Tsafou KP,Kuhn M,Bork P,Jensen LJ,von Mering C
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

SVD-phy: improved prediction of protein functional associations through singular value decomposition of phylogenetic profiles.

Franceschini A,Lin J,von Mering C,Jensen LJ
Bioinformatics 2015

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STRING v9.1: protein-protein interaction networks, with increased coverage and integration.

Franceschini A,Szklarczyk D,Frankild S,Kuhn M,Simonovic M,Roth A,Lin J,Minguez P,Bork P,von Mering C,Jensen LJ
Nucleic Acids Res 2012

View Paper (PubMed) View Publication

STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.

Szklarczyk D,Gable AL,Lyon D,Junge A,Wyder S,Huerta-Cepas J,Simonovic M,Doncheva NT,Morris JH,Bork P,Jensen LJ,Mering CV
Nucleic Acids Res 2018

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The STRING database in 2017: quality-controlled protein-protein association networks, made broadly accessible.

Szklarczyk D,Morris JH,Cook H,Kuhn M,Wyder S,Simonovic M,Santos A,Doncheva NT,Roth A,Bork P,Jensen LJ,von Mering C
Nucleic Acids Res 2016

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