Edits to 'https://fairsharing.org/FAIRsharing.9btRvC' by 'The FAIRsharing Team' at 15:08, 09 Feb 2021 (approved):
'dataProcesses' has been modified:
Before:
data versioning, data versioning,
data release, data release,
curation, data curation, https://db.cngb.org/cnsa/curate/?
download, data access, https://db.cngb.org/download/
Submitting Data, data curation, https://db.cngb.org/submission/
Access to Restricted Data, data access, https://db.cngb.org/data_access/
After:
curation, data curation, https://db.cngb.org/cnsa/curate/?
download, data access, https://db.cngb.org/download/
Submitting Data, data curation, https://db.cngb.org/cnsa/submit/
Access to Restricted Data, data access, https://db.cngb.org/data_access/
Added:
Submitting Data, data curation, https://db.cngb.org/cnsa/submit/
Removed:
data versioning, data versioning,
data release, data release,
Submitting Data, data curation, https://db.cngb.org/submission/
'onto_disciplines' has been modified:
Before:
Data Integration
Data Management
Data Submission, Annotation and Curation
After:
Data Integration
Data Management
Data Submission, Annotation and Curation
Life Science
Added:
Life Science
Removed:
'description' has been modified:
Before: The China National GeneBank database (CNGBdb) is a unified platform for biological big data sharing and application services. At present, CNGBdb has integrated a large amount of internal and external biological data from resources such as CNGB, NCBI, and the EBI.
There are 12 sub databases in CNGBdb, including literature, variation, gene, genome, protein, sequence, organism, project, sample, experiment, run, and assembly. Based on underlying big data and cloud computing technologies, it provides various data services, including archive, analysis, knowledge search, management authorization of biological data.
CNGBdb adopts data structures and standards of international omics, health, and medicine, such as The International Nucleotide Sequence Database Collaboration (INSDC), The Global Alliance for Genomics and Health GA4GH (GA4GH), Global Genome Biodiversity Network (GGBN), American College of Medical Genetics and Genomics (ACMG), and constructs standardized data and structures with wide compatibility.
All public data and data services provided by CNGBdb are freely available to all users worldwide.
After: The China National GeneBank database (CNGBdb) is a unified platform for biological big data sharing and application services. At present, CNGBdb has integrated a large amount of internal and external biological data from resources such as CNGB, NCBI, and the EBI.
There are a number of sub databases in CNGBdb, including literature, variation, gene, genome, protein, sequence, organism, project, sample, experiment, run, and assembly. Based on underlying big data and cloud computing technologies, it provides various data services, including archive, analysis, knowledge search, management authorization of biological data.
CNGBdb adopts data structures and standards of international omics, health, and medicine, such as The International Nucleotide Sequence Database Collaboration (INSDC), The Global Alliance for Genomics and Health GA4GH (GA4GH), Global Genome Biodiversity Network (GGBN), American College of Medical Genetics and Genomics (ACMG), and constructs standardized data and structures with wide compatibility.
All public data and data services provided by CNGBdb are freely available to all users worldwide.
'onto_domains' has been modified:
Before:
Experiment report
data storage
After:
Experimental measurement
data storage
Added:
Experimental measurement
Removed:
Experiment report
Edits to 'https://fairsharing.org/FAIRsharing.9btRvC' by 'The FAIRsharing Team' at 10:57, 19 Dec 2018 (approved):
'organizations' has been modified:
Before:
China National GeneBank, Shenzhen, China|http://www.cngb.org|Maintains
National Natural Science Foundation of China (NSFC), Beijing, China|http://www.nsfc.gov.cn/.|Funds
After:
National Natural Science Foundation of China (NSFC), Beijing, China|http://www.nsfc.gov.cn/|Funds
China National GeneBank, Shenzhen, China|http://www.cngb.org|Maintains
Added:
National Natural Science Foundation of China (NSFC), Beijing, China|http://www.nsfc.gov.cn/|Funds
Removed:
National Natural Science Foundation of China (NSFC), Beijing, China|http://www.nsfc.gov.cn/.|Funds
'standardsImplemented' has been modified:
Before:
After:
Global Alliance for Genomics and Health Metadata Model
Added:
Global Alliance for Genomics and Health Metadata Model
Removed:
'taxonomies' has been modified:
Before:
After:
All
Added:
All
Removed:
'supportLinks' has been modified:
Before:
FAQ|https://db.cngb.org/faq/
email|NGB_DC@genomics.cn
help|https://db.cngb.org/handbook/
After:
FAQ|https://db.cngb.org/faq/
email|NGB_DC@genomics.cn
help|https://db.cngb.org/handbook/
online documentation|https://db.cngb.org/data_standard/
online documentation|https://db.cngb.org/news/
online documentation|https://db.cngb.org/about/
Added:
online documentation|https://db.cngb.org/data_standard/
online documentation|https://db.cngb.org/news/
online documentation|https://db.cngb.org/about/
Removed:
'description' has been modified:
Before: The China National GeneBank (CNGB) based in Shenzhen was established in January 2011 and officially opened on 22 September 2016 to act as a platform for integrating resources and capabilities to support the development of the life sciences and bio-economy in China. The CNGB has integrated five arms divided into three "banks" and two "platforms." The banks include a Biorepository, Bio-informatics Data Center and Living Biobank, while the platforms consist of a Digitalization Platform, as well as a Synthesis and Editing Platform.
To establish a unified shared portal to CNGB and archive the results in the whole life of scientific research, we present CNGBdb, a unified platform for biological big data sharing and application services. At present, CNGBdb has integrated large amount of internal and external biological data from CNGB, NCBI, EBI, etc. There are 14 internal scientific databases from CNGB such as Data Integration Solution for Systematic Exploration of Cancer Traits (DISSECT), Pan Immune Repertoire Database (PIRD), and Genetic Disease and Rare Disease database (GDRD). The DISSECT is a comprehensive data integration platform for cancer research, including the first mirror site of ICGC Data Portal in China, which has already stored genomic and clinical data of 37 projects, with 50181 samples, 59,615 genes, 8 analysis tools, and the total data volume of 18GB. The PIRD mainly focuses on immune data related to human body. It collects BCR and TCR sequencing data of various diseases and experimental information, and phenotype information of corresponding individuals. The PIRD V1 stores 4.7TB raw data and 37GB compressed analysis data of 1,923 samples, which provides data comparison and visualization services for disease and health researchers and clinicians. GDRD is an integrated platform for research and application of genetic diseases and rare diseases, which focuses on collection, storage, analysis and mining of human genetic data and phenotype data. Now in GDRD phase I, approximately 7,000 papers, 10,000 causative variants and 300 families with rare disorders from BGI have been organized and presented on the website as well as ClinVar and OMIM database. In addition, CNGBdb provides an automated interpretation process that helps clinicians analysis the results of genetic testing, greatly improving interpretation efficiency and avoiding human error. The total amount of internal data source has reached 600TB.
There are 12 sub databases in CNGBdb, including literature, variation, gene, genome, protein, sequence, organism, project, sample, experiment, run, and assembly. Based on underlying big data and cloud computing technologies, it provides various data services, including archive, analysis, knowledge search, management authorization of biological data.
CNGBdb adopts data structures and standards of international omics, health, and medicine, such as The International Nucleotide Sequence Database Collaboration (INSDC), The Global Alliance for Genomics and Health GA4GH (GA4GH), Global Genome Biodiversity Network (GGBN), American College of Medical Genetics and Genomics (ACMG), and constructs standardized data standards and structures with wide compatibility.
All public data and data services provided by CNGBdb are freely available to all users worldwide, which will alleviate the burdens of biological big data management, promote the effective use of data and the development of life sciences and bioindustry.
After: The China National GeneBank database (CNGBdb) is a unified platform for biological big data sharing and application services. At present, CNGBdb has integrated a large amount of internal and external biological data from resources such as CNGB, NCBI, and the EBI.
There are 12 sub databases in CNGBdb, including literature, variation, gene, genome, protein, sequence, organism, project, sample, experiment, run, and assembly. Based on underlying big data and cloud computing technologies, it provides various data services, including archive, analysis, knowledge search, management authorization of biological data.
CNGBdb adopts data structures and standards of international omics, health, and medicine, such as The International Nucleotide Sequence Database Collaboration (INSDC), The Global Alliance for Genomics and Health GA4GH (GA4GH), Global Genome Biodiversity Network (GGBN), American College of Medical Genetics and Genomics (ACMG), and constructs standardized data and structures with wide compatibility.
All public data and data services provided by CNGBdb are freely available to all users worldwide.
'user_defined_tags' has been modified:
Before:
After:
Data sharing
Added:
Data sharing
Removed:
'onto_disciplines' has been modified:
Before:
After:
Data Integration and Warehousing
Data Management
Data Submission, Annotation and Curation
Added:
Data Integration and Warehousing
Data Management
Data Submission, Annotation and Curation
Removed:
'onto_domains' has been modified:
Before:
After:
Experiment report
data storage
Added:
Experiment report
data storage
Removed:
'dataProcesses' has been modified:
Before:
data versioning
data release
curation
download
After:
data versioning
data release
curation
download
Submitting Data
Access to Restricted Data
Added:
Submitting Data
Access to Restricted Data
Removed:
'accessPoints' has been modified:
Before:
Other|https://db.cngb.org/blast/blast/blastn/|BLAST
Other|https://db.cngb.org/pvd/|pvd
Other|https://db.cngb.org/dissect/|DISSECT
After:
Added:
Removed:
Other|https://db.cngb.org/blast/blast/blastn/|BLAST
Other|https://db.cngb.org/pvd/|pvd
Other|https://db.cngb.org/dissect/|DISSECT
'tools' has been modified:
Before:
After:
BLAST||https://db.cngb.org/blast/blast/blastn/
Pathogen Variation||https://db.cngb.org/pvd/
DISSECT||https://db.cngb.org/dissect/
Added:
BLAST||https://db.cngb.org/blast/blast/blastn/
Pathogen Variation||https://db.cngb.org/pvd/
DISSECT||https://db.cngb.org/dissect/
Removed:
China National GeneBank DataBase
