databases > DOI:10.25504/FAIRsharing.brrt0b
FAIRsharing is now available for record creation, update, and search at, please visit us there! This read-only version of the legacy site will be replaced with the new version of FAIRsharing in the coming weeks.

ready Datasets2Tools


General Information
Biomedical data repositories such as the Gene Expression Omnibus (GEO) enable the search and discovery of relevant biomedical digital data objects. Similarly, resources such as OMICtools index bioinformatics tools that can extract knowledge from these digital data objects. However, systematic access to pre-generated “canned" analyses applied by bioinformatics tools to biomedical digital data objects is currently not available. Datasets2Tools is a repository indexing 31,473 canned bioinformatics analyses applied to 6,431 datasets. The Datasets2Tools repository also contains the indexing of 4,901 published bioinformatics software tools, and all the analyzed datasets. Datasets2Tools enables users to rapidly find datasets, tools, and canned analyses through an intuitive web interface, a Google Chrome extension, and an API. Furthermore, Datasets2Tools provides a platform for contributing canned analyses, datasets, and tools, as well as evaluating these digital objects according to their compliance with the findable, accessible, interoperable, and reusable (FAIR) principles. By incorporating community engagement, Datasets2Tools promotes sharing of digital resources to stimulate the extraction of knowledge from biomedical research data.


Countries that developed this resource United States

Created in 2018

Taxonomic range

Knowledge Domains 


How to cite this record D2T; Datasets2Tools; DOI:; Last edited: Oct. 24, 2019, 1:32 p.m.; Last accessed: Oct 25 2021 11:02 a.m.

This record is maintained by Avi Ma'ayan  (AviMaayan)

Record added: Jan. 25, 2018, 6:23 p.m.
Record updated: Oct. 24, 2019, 1:22 p.m. by The FAIRsharing Team.

Show edit history



Additional Information

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Curation

REST Web Services


No publications available

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined


No metrics standards defined

Related Databases

Implementing Policies

This record is not implemented by any policy.


Record Maintainer



Grant Number(s)