Record updated: Sept. 24, 2018, noon by The FAIRsharing Team.

Edits to 'https://fairsharing.org/FAIRsharing.dmhjcg' by 'The FAIRsharing Team' at 12:26, 12 Sep 2018 (not approved):

	'miriam_id' has been modified:
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		After: None

	'description' has been modified:
		Before: An XML format for quality-related data of mass spectrometry and other high-throughput experiments.
Quality control is increasingly recognized as a crucial aspect of mass spectrometry based proteomics. Several recent papers discuss relevant parameters for quality control and present applications to extract these from the instrumental raw data. What has been missing, however, is a standard data exchange format for reporting these performance metrics. We therefore developed the qcML format, an XML-based standard that follows the design principles of the related mzML, mzIdentML, mzQuantML, and TraML standards from the HUPO-PSI (Proteomics Standards Initiative). In addition to the XML format, we also provide tools for the calculation of a wide range of quality metrics as well as a database format and interconversion tools, so that existing LIMS systems can easily add relational storage of the quality control data to their existing schema. We here describe the qcML specification, along with possible use cases and an illustrative example of the subsequent analysis possibilities. 
		After: An XML format for quality-related data of mass spectrometry and other high-throughput experiments.
Quality control is increasingly recognized as a crucial aspect of mass spectrometry based proteomics. Several recent papers discuss relevant parameters for quality control and present applications to extract these from the instrumental raw data. What has been missing, however, is a standard data exchange format for reporting these performance metrics. We therefore developed the qcML format, an XML-based standard that follows the design principles of the related mzML, mzIdentML, mzQuantML, and TraML standards from the HUPO-PSI (Proteomics Standards Initiative). In addition to the XML format, we also provide tools for the calculation of a wide range of quality metrics as well as a database format and interconversion tools, so that existing LIMS systems can easily add relational storage of the quality control data to their existing schema. We here describe the qcML specification, along with possible use cases and an illustrative example of the subsequent analysis possibilities.

            

Edits to 'https://fairsharing.org/FAIRsharing.dmhjcg' by 'The FAIRsharing Team' at 11:19, 15 Mar 2018 (approved):

	'miriam_url' has been modified:
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Edits to 'https://fairsharing.org/FAIRsharing.dmhjcg' by 'HUPOPSI' at 15:01, 02 Sep 2017 (approved):

	'homepage' has been modified:
		Before: https://github.com/HUPO-PSI/qcML-development
		After: http://www.psidev.info/groups/quality-control

            

Edits to 'https://fairsharing.org/FAIRsharing.dmhjcg' by 'HUPOPSI' at 11:54, 30 Aug 2017 (approved):

	'homepage' has been modified:
		Before: http://code.google.com/p/qcml
		After: https://github.com/HUPO-PSI/qcML-development

            

Edits to 'https://fairsharing.org/FAIRsharing.dmhjcg' by 'The FAIRsharing Team' at 09:13, 08 Sep 2016 (approved):

	'description' has been modified:
		Before: An XML format for quality-related data of mass spectrometry and other high-throughput experiments. Quality control is increasingly recognized as a crucial aspect of mass spectrometry based proteomics. Several recent papers discuss relevant parameters for quality control and present applications to extract these from the instrumental raw data. What has been missing|however|is a standard data exchange format for reporting these performance metrics. We therefore developed the qcML format|an XML-based standard that follows the design principles of the related mzML|mzIdentML|mzQuantML|and TraML standards from the HUPO-PSI (Proteomics Standards Initiative). In addition to the XML format|we also provide tools for the calculation of a wide range of quality metrics as well as a database format and interconversion tools|so that existing LIMS systems can easily add relational storage of the quality control data to their existing schema. We here describe the qcML specification|along with possible use cases and an illustrative example of the subsequent analysis possibilities. This record is marked as uncertain because Google Code projects are all now archived|and there is no clear replacement for the homepage for this project.
		After: An XML format for quality-related data of mass spectrometry and other high-throughput experiments. Quality control is increasingly recognized as a crucial aspect of mass spectrometry based proteomics. Several recent papers discuss relevant parameters for quality control and present applications to extract these from the instrumental raw data. What has been missing|however|is a standard data exchange format for reporting these performance metrics. We therefore developed the qcML format|an XML-based standard that follows the design principles of the related mzML|mzIdentML|mzQuantML|and TraML standards from the HUPO-PSI (Proteomics Standards Initiative). In addition to the XML format|we also provide tools for the calculation of a wide range of quality metrics as well as a database format and interconversion tools|so that existing LIMS systems can easily add relational storage of the quality control data to their existing schema. We here describe the qcML specification|along with possible use cases and an illustrative example of the subsequent analysis possibilities. 

            

Edits to 'https://fairsharing.org/FAIRsharing.dmhjcg' by 'The FAIRsharing Team' at 19:41, 04 Sep 2016 (approved):

	'description' has been modified:
		Before: An XML format for quality-related data of mass spectrometry and other high-throughput experiments. Quality control is increasingly recognized as a crucial aspect of mass spectrometry based proteomics. Several recent papers discuss relevant parameters for quality control and present applications to extract these from the instrumental raw data. What has been missing|however|is a standard data exchange format for reporting these performance metrics. We therefore developed the qcML format|an XML-based standard that follows the design principles of the related mzML|mzIdentML|mzQuantML|and TraML standards from the HUPO-PSI (Proteomics Standards Initiative). In addition to the XML format|we also provide tools for the calculation of a wide range of quality metrics as well as a database format and interconversion tools|so that existing LIMS systems can easily add relational storage of the quality control data to their existing schema. We here describe the qcML specification|along with possible use cases and an illustrative example of the subsequent analysis possibilities. All information about qcML is available at http://code.google.com/p/qcml . This record is marked as uncertain because Google Code projects are all now archived|and there is no clear replacement for the homepage for this project.
		After: An XML format for quality-related data of mass spectrometry and other high-throughput experiments. Quality control is increasingly recognized as a crucial aspect of mass spectrometry based proteomics. Several recent papers discuss relevant parameters for quality control and present applications to extract these from the instrumental raw data. What has been missing|however|is a standard data exchange format for reporting these performance metrics. We therefore developed the qcML format|an XML-based standard that follows the design principles of the related mzML|mzIdentML|mzQuantML|and TraML standards from the HUPO-PSI (Proteomics Standards Initiative). In addition to the XML format|we also provide tools for the calculation of a wide range of quality metrics as well as a database format and interconversion tools|so that existing LIMS systems can easily add relational storage of the quality control data to their existing schema. We here describe the qcML specification|along with possible use cases and an illustrative example of the subsequent analysis possibilities. This record is marked as uncertain because Google Code projects are all now archived|and there is no clear replacement for the homepage for this project.