Record added: Aug. 7, 2020, 8 p.m.
Record updated: Oct. 6, 2020, 10:47 a.m. by The FAIRsharing Team.

Edits to 'https://fairsharing.org/FAIRsharing.eZ0fzl' by 'The FAIRsharing Team' at 10:47, 06 Oct 2020 (approved):

	'publications' has been modified:
		Before:
			The ADC API: A Web API for the Programmatic Query of the AIRR Data Commons|Christley S, Aguiar A, Blanck G, Breden F, Bukhari S, Busse C, Jaglale J, Harikrishnan S., Laserson U, Peters B, Rocha A, Schramm C., Taylor S, Vander Heiden J, Zimonja B, Watson C., Corrie B, Cowell L|Frontiers in Big Data|2020
		After:
			The ADC API: A Web API for the Programmatic Query of the AIRR Data Commons|Christley S, Aguiar A, Blanck G, Breden F, Bukhari S, Busse C, Jaglale J, Harikrishnan S., Laserson U, Peters B, Rocha A, Schramm C., Taylor S, Vander Heiden J, Zimonja B, Watson C., Corrie B, Cowell L|Frontiers in Big Data|2020
			AIRR Community Standardized Representations for Annotated Immune Repertoires.|Vander Heiden JA,Marquez S,Marthandan N,Bukhari SAC,Busse CE,Corrie B,Hershberg U,Kleinstein SH,Matsen Iv FA,Ralph DK,Rosenfeld AM,Schramm CA,Christley S,Laserson U|Front Immunol|2018
		Added:
			AIRR Community Standardized Representations for Annotated Immune Repertoires.|Vander Heiden JA,Marquez S,Marthandan N,Bukhari SAC,Busse CE,Corrie B,Hershberg U,Kleinstein SH,Matsen Iv FA,Ralph DK,Rosenfeld AM,Schramm CA,Christley S,Laserson U|Front Immunol|2018
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.eZ0fzl' by 'The FAIRsharing Team' at 10:26, 06 Oct 2020 (approved):

	'supportLinks' has been modified:
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		After:
			online documentation|https://github.com/airr-community/airr-standards
		Added:
			online documentation|https://github.com/airr-community/airr-standards
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	'name' has been modified:
		Before: AIRR Repertoire File Format
		After: Adaptive Immune Receptor Repertoire: Repertoire Schema

	'licences' has been modified:
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		After:
			Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
		Added:
			Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
		Removed:

	'dataProcesses' has been modified:
		Before:
		After:
			Download Full Schema, data release, https://github.com/airr-community/airr-standards/blob/master/specs/airr-schema.yaml
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			Download Full Schema, data release, https://github.com/airr-community/airr-standards/blob/master/specs/airr-schema.yaml
		Removed:

	'shortname' has been modified:
		Before: AIRR Repertoire JSON
		After: AIRR Repertoire Schema

	'description' has been modified:
		Before: Increased interest in the immune system's involvement in pathophysiological phenomena coupled with decreased DNA sequencing costs have led to an explosion of antibody and T cell receptor sequencing data collectively termed "adaptive immune receptor repertoire sequencing" (AIRR-seq or Rep-Seq). The AIRR Community has been actively working to standardize protocols, metadata, formats, APIs, and other guidelines to promote open and reproducible studies of the immune repertoire. The AIRR Community Data Representation Working Group has developed standardized data representations for storing and sharing annotated antibody and T cell receptor data. The AIRR Repertoire JSON file format provides a mechanism to share AIRR Repertoire metadata between research projects.
		After: The Adaptive Immune Receptor Repertoire (AIRR) Repertoire Schema, part of the AIRR Data Model, describes an abstract organizational unit of analysis that is defined by the researcher and consists of study metadata, subject metadata, sample metadata, cell processing metadata, nucleic acid processing metadata, sequencing run metadata, a set of raw sequence files, data processing metadata, and a set of Rearrangements. A Repertoire gathers all of this information together into a composite object, which can be easily accessed by computer programs for data entry, analysis and visualization. The AIRR Repertoire Schema has been implemented in YAML/JSON, which provides a mechanism to share AIRR Repertoire metadata between research projects.

            

Edits to 'https://fairsharing.org/FAIRsharing.eZ0fzl' by 'The FAIRsharing Team' at 10:38, 14 Aug 2020 (approved):

	'description' has been modified:
		Before: Increased interest in the immune system's involvement in pathophysiological phenomena coupled with decreased DNA sequencing costs have led to an explosion of antibody and T cell receptor sequencing data collectively termed "adaptive immune receptor repertoire sequencing" (AIRR-seq or Rep-Seq). The AIRR Community has been actively working to standardize protocols, metadata, formats, APIs, and other guidelines to promote open and reproducible studies of the immune repertoire. In this paper, we describe the work of the AIRR Community's Data Representation Working Group to develop standardized data representations for storing and sharing annotated antibody and T cell receptor data. The AIRR Repertoire JSON file format provides a mechanism to share AIRR Repertoire metadata between research projects.
		After: Increased interest in the immune system's involvement in pathophysiological phenomena coupled with decreased DNA sequencing costs have led to an explosion of antibody and T cell receptor sequencing data collectively termed "adaptive immune receptor repertoire sequencing" (AIRR-seq or Rep-Seq). The AIRR Community has been actively working to standardize protocols, metadata, formats, APIs, and other guidelines to promote open and reproducible studies of the immune repertoire. The AIRR Community Data Representation Working Group has developed standardized data representations for storing and sharing annotated antibody and T cell receptor data. The AIRR Repertoire JSON file format provides a mechanism to share AIRR Repertoire metadata between research projects.