Kinetic Simulation Algorithm Ontology
Abbreviation: KiSAO
Homepage http://co.mbine.org/standards/kisao
Countries that developed this resource European Union
Created in 2015
Taxonomic range
Knowledge Domains
Subjects
User-defined Tags
How to cite this record FAIRsharing.org: KiSAO; Kinetic Simulation Algorithm Ontology; DOI: https://doi.org/10.25504/FAIRsharing.jcg19w; Last edited: Dec. 17, 2019, 5:19 p.m.; Last accessed: Apr 13 2021 2:02 p.m.
Record updated: Nov. 28, 2019, 3:53 p.m. by The FAIRsharing Team.
contact form | Submit a ticket |
Mailing List | None |
online documentation | Support of KiSAO |
Additional Information
Contact | Nicolas Le Novère ORCID |
External Links
Bioportal | http://bioportal.bioontology.org/ontologies/KISAO |
OBO | http://obofoundry.org/ontology/kisao.html |
No XSD schemas defined
Conditions of Use
Data Access
Download | http://svn.code.sf.net/p/kisao/code/tags/ |
Search | http://co.mbine.org/standards/kisao |
Controlled vocabularies and semantics in systems biology.
Courtot M,Juty N,Knupfer C,Waltemath D,Zhukova A,Drager A,Dumontier M,Finney A,Golebiewski M,Hastings J,Hoops S,Keating S,Kell DB,Kerrien S,Lawson J,Lister A,Lu J,Machne R,Mendes P,Pocock M,Rodriguez N,Villeger A,Wilkinson DJ,Wimalaratne S,Laibe C,Hucka M,Le Novere N
Mol Syst Biol 2011
View in BioPortal.
View in OBO Foundry.
Reporting Guidelines
Terminology Artifacts
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.
BioSimulators
BioSimulators is a registry of containerized biosimulation tools that provide consistent command-line interfaces. The BioSimulations web application helps investigators browse this registry to find simulation tools that have the capabilities (supported modeling frameworks, simulation algorithms, and modeling formats) needed for specific modeling projects.
BioSimulations
BioSimulations is a web application for sharing and re-using biomodels, simulations, and visualizations of simulations results. BioSimulations supports a wide range of modeling frameworks (e.g., kinetic, constraint-based, and logical modeling), model formats (e.g., BNGL, CellML, SBML), and simulation tools (e.g., COPASI, libRoadRunner/tellurium, NFSim, VCell). BioSimulations aims to help researchers discover published models that might be useful for their research and quickly try them via a simple web-based interface.
This record is not implemented by any policy.
Record Maintainer
Maintains