databases > DOI:10.25504/FAIRsharing.ktafj3

ready Database of genomic structural VARiation

Abbreviation:dbVar

Recommended
General Information
dbVar is a database of human genomic structural variation where users can search, view, and download data from submitted studies. dbVar stopped supporting data from non-human organisms in 2017, however existing non-human data remains available. In keeping with the common definition of structural variation, most variants are larger than 50 basepairs in length - however a handful of smaller variants may also be found. dbVar provides access to the raw data whenever available, as well as links to additional resources, from both NCBI and elsewhere. It can accept diverse types of events, including inversions, insertions and translocations. Additionally, both germline and somatic variants are accepted.


This record replaces or incorporates the following deprecated resources:

Homepage http://www.ncbi.nlm.nih.gov/dbvar/

Countries that developed this resource United States

Created in 2010

Taxonomic range





How to cite this record FAIRsharing.org: dbVar; Database of genomic structural VARiation; DOI: https://doi.org/10.25504/FAIRsharing.ktafj3; Last edited: March 2, 2021, 4:29 p.m.; Last accessed: Jun 21 2021 10:33 p.m.


This record is maintained by dbSNP

Record updated: March 2, 2021, 2:22 p.m. by The FAIRsharing Team.

Show edit history



Support

General


Tools

    No tools defined




Publications

DbVar and DGVa: public archives for genomic structural variation.

Lappalainen I., Lopez J., Skipper L., Hefferon T., Spalding JD., Garner J., Chen C., Maguire M., Corbett M., Zhou G., Paschall J., Ananiev V., Flicek P., Church DM.,
Nucleic Acids Res. 2013

View Paper (PubMed) View Publication

Related Standards

Terminology Artifacts

No semantic standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

Credit

Record Maintainer

  • This record is maintained by dbSNP

Maintains